12 homologs were found in PanDaTox collection
for query gene RPC_1237 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_1237    100 
 
 		 225 bp  446  1e-123  Rhodopseudomonas palustris BisB18  Bacteria  hitchhiker  0.000103856  unclonable  0.0000000163408 
 
 
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NC_007778  RPB_4035  two component LuxR family transcriptional regulator  91.43 
 
 		 687 bp  228  5.0000000000000005e-58  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
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NC_007958  RPD_3789  response regulator receiver  90.86 
 
 		 687 bp  220  1e-55  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0916709 
 
 
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NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  87.86 
 
 		 687 bp  176  1.9999999999999998e-42  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
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NC_007778  RPB_4449  two component LuxR family transcriptional regulator  84.03 
 
 		 693 bp  87.7  0.000000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.683214 
 
 
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NC_011004  Rpal_3423  two component transcriptional regulator, LuxR family  84.35 
 
 		 708 bp  85.7  0.000000000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.324081  n/a   
 
 
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NC_009485  BBta_3079  two component LuxR family transcriptional regulator  91.53 
 
 		 702 bp  77.8  0.000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
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NC_007925  RPC_3790  two component LuxR family transcriptional regulator  81.48 
 
 		 681 bp  56  0.000004  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
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NC_007958  RPD_2401  response regulator receiver  81.31 
 
 		 693 bp  54  0.00002  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0808908 
 
 
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NC_010511  M446_5717  two component LuxR family transcriptional regulator  96.55 
 
 		 663 bp  50.1  0.0003  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
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NC_008825  Mpe_A3621  response regulatory protein  93.55 
 
 		 732 bp  46.1  0.004  Methylibium petroleiphilum PM1  Bacteria  normal  0.0192509  normal  0.145723 
 
 
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NC_011886  Achl_3561  transcriptional regulator, LuxR family  93.55 
 
 		 2727 bp  46.1  0.004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
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