25 homologs were found in PanDaTox collection
for query gene RPC_1062 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_1062  hypothetical protein  100 
 
 		 244 aa  487  1e-137  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_3293  hypothetical protein  70.46 
 
 		 237 aa  310  1e-83  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A1327  hypothetical protein  32.88 
 
 		 250 aa  115  7.999999999999999e-25  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_0028  hypothetical protein  32.86 
 
 		 218 aa  57.4  0.0000002  Methylobacterium extorquens PA1  Bacteria  normal  0.920505  normal  1 
 
 
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NC_011071  Smal_1077  phosphoribosyl-dephospho-CoA transferase  26.94 
 
 		 213 aa  55.5  0.0000008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_0029  holo-ACP synthase, malonate decarboxylase-specific  32.33 
 
 		 219 aa  54.7  0.000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0520843  normal  1 
 
 
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NC_011894  Mnod_3155  holo-ACP synthase, malonate decarboxylase-specific  29.94 
 
 		 218 aa  54.3  0.000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
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NC_007908  Rfer_1847  malonate decarboxylase  28.25 
 
 		 231 aa  51.6  0.00001  Rhodoferax ferrireducens T118  Bacteria  normal  0.705884  n/a   
 
 
-
 
NC_010508  Bcenmc03_1245  phosphoribosyl-dephospho-CoA transferase  31.4 
 
 		 222 aa  50.8  0.00002  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0753275 
 
 
-
 
NC_010511  M446_6853  hypothetical protein  31.62 
 
 		 218 aa  50.4  0.00002  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_0050  hypothetical protein  31.1 
 
 		 219 aa  50.1  0.00003  Methylobacterium populi BJ001  Bacteria  normal  0.390549  normal  0.0698555 
 
 
-
 
NC_010002  Daci_1764  holo-ACP synthase, malonate decarboxylase-specific  30.95 
 
 		 237 aa  49.3  0.00005  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008542  Bcen2424_1273  phosphoribosyl-dephospho-CoA transferase  31.68 
 
 		 222 aa  47.8  0.0002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0280828  n/a   
 
 
-
 
NC_008060  Bcen_0792  phosphoribosyl-dephospho-CoA transferase  31.68 
 
 		 222 aa  47.8  0.0002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.147641  n/a   
 
 
-
 
NC_009511  Swit_4290  hypothetical protein  36.84 
 
 		 209 aa  46.2  0.0005  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_3188  holo-ACP synthase, malonate decarboxylase-specific  32.28 
 
 		 245 aa  45.1  0.001  Methylocella silvestris BL2  Bacteria  n/a    normal  0.605974 
 
 
-
 
NC_007204  Psyc_1142  putative malonate decarboxylase, subunit E  29.81 
 
 		 234 aa  44.3  0.002  Psychrobacter arcticus 273-4  Bacteria  normal  0.0172841  normal  0.360178 
 
 
-
 
NC_009656  PSPA7_0297  phosphoribosyl-dephospho-CoA transferase  29.66 
 
 		 230 aa  43.1  0.003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.4721  n/a   
 
 
-
 
NC_009080  BMA10247_0543  phosphoribosyl-dephospho-CoA transferase  52.27 
 
 		 308 aa  42.4  0.006  Burkholderia mallei NCTC 10247  Bacteria  normal  0.39768  n/a   
 
 
-
 
NC_008836  BMA10229_A0610  phosphoribosyl-dephospho-CoA transferase  52.27 
 
 		 296 aa  42.7  0.006  Burkholderia mallei NCTC 10229  Bacteria  normal  0.785994  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1260  phosphoribosyl-dephospho-CoA transferase  52.27 
 
 		 296 aa  42.7  0.006  Burkholderia mallei SAVP1  Bacteria  normal  0.199636  n/a   
 
 
-
 
NC_006348  BMA3033  phosphoribosyl-dephospho-CoA transferase  52.27 
 
 		 308 aa  42.4  0.006  Burkholderia mallei ATCC 23344  Bacteria  normal  0.623128  n/a   
 
 
-
 
NC_009076  BURPS1106A_1486  phosphoribosyl-dephospho-CoA transferase  52.27 
 
 		 308 aa  42.4  0.007  Burkholderia pseudomallei 1106a  Bacteria  normal  0.876381  n/a   
 
 
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NC_007434  BURPS1710b_1587  phosphoribosyl-dephospho-CoA transferase  52.27 
 
 		 307 aa  42.4  0.007  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009074  BURPS668_1456  phosphoribosyl-dephospho-CoA transferase  52.27 
 
 		 308 aa  42.4  0.008  Burkholderia pseudomallei 668  Bacteria  normal  0.0184396  n/a   
 
 
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