10 homologs were found in PanDaTox collection
for query gene RPC_0013 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_0013  Cbb3-type cytochrome oxidase component  100 
 
 		 54 aa  108  3e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_0015  Cbb3-type cytochrome oxidase component  70.37 
 
 		 54 aa  80.9  0.000000000000006  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_0732  Cbb3-type cytochrome oxidase component  68.52 
 
 		 54 aa  76.6  0.0000000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0430029  normal  1 
 
 
-
 
NC_011004  Rpal_0018  Cbb3-type cytochrome oxidase component  68.52 
 
 		 54 aa  75.9  0.0000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_3272  Cbb3-type cytochrome oxidase component  48.84 
 
 		 49 aa  48.9  0.00002  Methylobacterium sp. 4-46  Bacteria  normal  0.348375  normal  0.349252 
 
 
-
 
NC_009719  Plav_1530  Cbb3-type cytochrome oxidase component  59.38 
 
 		 74 aa  45.8  0.0002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_2113  Cbb3-type cytochrome oxidase component  53.12 
 
 		 49 aa  45.1  0.0004  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
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NC_011894  Mnod_5232  Cbb3-type cytochrome oxidase component  53.12 
 
 		 49 aa  45.1  0.0004  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.346286  n/a   
 
 
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NC_008347  Mmar10_1151  Cbb3-type cytochrome oxidase component  48.84 
 
 		 65 aa  43.5  0.001  Maricaulis maris MCS10  Bacteria  normal  0.340113  normal  0.0945912 
 
 
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NC_011666  Msil_3661  Cbb3-type cytochrome oxidase component  56.25 
 
 		 50 aa  41.6  0.004  Methylocella silvestris BL2  Bacteria  n/a    normal  0.678332 
 
 
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