10 homologs were found in PanDaTox collection
for query gene Psyc_0021 on replicon NC_007204
Organism: Psychrobacter arcticus 273-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007204  Psyc_0021  hypothetical protein  100 
 
 
125 aa  253  6e-67  Psychrobacter arcticus 273-4  Bacteria  normal  0.256356  normal  0.0439162 
 
 
-
 
NC_007969  Pcryo_0027  DsrE-like protein  95.2 
 
 
125 aa  239  7e-63  Psychrobacter cryohalolentis K5  Bacteria  normal  0.0971578  normal 
 
 
-
 
NC_007973  Rmet_2367  hypothetical protein  52.42 
 
 
141 aa  139  1.9999999999999998e-32  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.0000559969  hitchhiker  0.0000210023 
 
 
-
 
NC_013739  Cwoe_3827  hypothetical protein  34.69 
 
 
123 aa  54.7  0.0000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.526399  normal 
 
 
-
 
NC_008697  Noca_4889  hypothetical protein  37.23 
 
 
121 aa  54.3  0.0000006  Nocardioides sp. JS614  Bacteria  normal  normal  0.254553 
 
 
-
 
NC_008751  Dvul_0884  DsrE family protein  27.18 
 
 
117 aa  43.5  0.001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_1186  hypothetical protein  43.08 
 
 
143 aa  43.1  0.001  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.0000110214  decreased coverage  0.000713842 
 
 
-
 
NC_007644  Moth_0433  DsrE-like protein  37.18 
 
 
117 aa  41.6  0.004  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.911258 
 
 
-
 
NC_011831  Cagg_3274  DsrE family protein  37.97 
 
 
117 aa  41.2  0.005  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0527364  normal 
 
 
-
 
NC_008825  Mpe_A1006  hypothetical protein  25 
 
 
122 aa  40.4  0.009  Methylibium petroleiphilum PM1  Bacteria  normal  0.966522  normal 
 
 
-
 
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