More than 300 homologs were found in PanDaTox collection
for query gene Pput_1872 on replicon NC_009512
Organism: Pseudomonas putida F1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009654  Mmwyl1_3912  methyl-accepting chemotaxis sensory transducer  52.67 
 
 
713 aa  776    Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3950  methyl-accepting chemotaxis transducer  98.2 
 
 
725 aa  1461    Pseudomonas putida KT2440  Bacteria  normal  normal  0.691578 
 
 
-
 
NC_009512  Pput_1872  methyl-accepting chemotaxis sensory transducer  100 
 
 
721 aa  1488    Pseudomonas putida F1  Bacteria  normal  normal  0.163736 
 
 
-
 
NC_008740  Maqu_2916  methyl-accepting chemotaxis sensory transducer  48.81 
 
 
713 aa  686    Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2865  methyl-accepting chemotaxis sensory transducer  84.35 
 
 
722 aa  1266    Pseudomonas putida W619  Bacteria  normal  normal  0.370999 
 
 
-
 
NC_013512  Sdel_1316  chemotaxis sensory transducer  33.9 
 
 
704 aa  363  4e-99  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.0285504  n/a   
 
 
-
 
NC_011899  Hore_00480  methyl-accepting chemotaxis sensory transducer  31.03 
 
 
676 aa  172  2e-41  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  38.64 
 
 
533 aa  171  4e-41  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  35.64 
 
 
549 aa  165  2.0000000000000002e-39  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.11 
 
 
632 aa  162  2e-38  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_3063  methyl-accepting chemotaxis sensory transducer  34.44 
 
 
533 aa  154  5e-36  Geobacter uraniireducens Rf4  Bacteria  normal  0.378908  n/a   
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  34.53 
 
 
547 aa  154  5.9999999999999996e-36  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  32.23 
 
 
549 aa  150  9e-35  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_012918  GM21_3345  methyl-accepting chemotaxis sensory transducer  33.99 
 
 
542 aa  149  2.0000000000000003e-34  Geobacter sp. M21  Bacteria  n/a    normal  0.0226154 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  30.93 
 
 
629 aa  147  5e-34  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_009943  Dole_1751  methyl-accepting chemotaxis sensory transducer  30.96 
 
 
739 aa  147  6e-34  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.000000403913  n/a   
 
 
-
 
NC_010814  Glov_3312  methyl-accepting chemotaxis sensory transducer  33.62 
 
 
533 aa  147  8.000000000000001e-34  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  35.15 
 
 
627 aa  146  1e-33  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
661 aa  147  1e-33  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  33.8 
 
 
547 aa  145  2e-33  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  34.41 
 
 
559 aa  145  3e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.17 
 
 
626 aa  145  4e-33  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  34.1 
 
 
547 aa  144  6e-33  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_002939  GSU2942  methyl-accepting chemotaxis protein  34.06 
 
 
544 aa  144  7e-33  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  32.18 
 
 
640 aa  144  7e-33  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  34.11 
 
 
716 aa  144  8e-33  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  33.53 
 
 
624 aa  143  9e-33  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  28.16 
 
 
629 aa  143  9e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
533 aa  143  9.999999999999999e-33  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0750  methyl-accepting chemotaxis protein, putative  37.83 
 
 
539 aa  142  1.9999999999999998e-32  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.64 
 
 
546 aa  142  1.9999999999999998e-32  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  32.79 
 
 
549 aa  141  3e-32  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  33.58 
 
 
643 aa  142  3e-32  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  35.13 
 
 
569 aa  142  3e-32  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  33.24 
 
 
624 aa  142  3e-32  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_013501  Rmar_2782  methyl-accepting chemotaxis sensory transducer  32.74 
 
 
601 aa  142  3e-32  Rhodothermus marinus DSM 4252  Bacteria  normal  0.163256  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  30.77 
 
 
632 aa  142  3e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  33.24 
 
 
712 aa  142  3e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  26.86 
 
 
554 aa  141  3.9999999999999997e-32  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0921  methyl-accepting chemotaxis sensory transducer  27.92 
 
 
677 aa  141  3.9999999999999997e-32  Marinomonas sp. MWYL1  Bacteria  normal  0.787316  normal 
 
 
-
 
NC_010814  Glov_1286  methyl-accepting chemotaxis sensory transducer  32.23 
 
 
538 aa  141  3.9999999999999997e-32  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.24 
 
 
624 aa  140  6e-32  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  31.34 
 
 
541 aa  140  7e-32  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  33.24 
 
 
712 aa  140  8.999999999999999e-32  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009483  Gura_0612  methyl-accepting chemotaxis sensory transducer  30.97 
 
 
543 aa  140  1e-31  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
638 aa  139  2e-31  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  34.31 
 
 
636 aa  139  2e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  32.07 
 
 
632 aa  139  2e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  33.04 
 
 
625 aa  139  2e-31  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  32.75 
 
 
628 aa  139  2e-31  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  32.49 
 
 
541 aa  138  3.0000000000000003e-31  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.16 
 
 
628 aa  138  3.0000000000000003e-31  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  33.24 
 
 
546 aa  137  5e-31  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0529  methyl-accepting chemotaxis sensory transducer  31.58 
 
 
544 aa  137  5e-31  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0771  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
822 aa  137  5e-31  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0809  methyl-accepting chemotaxis sensory transducer  35.1 
 
 
532 aa  137  8e-31  Geobacter bemidjiensis Bem  Bacteria  normal  0.826751  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  31.83 
 
 
713 aa  137  9e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  28.33 
 
 
638 aa  136  9.999999999999999e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  30.84 
 
 
702 aa  136  9.999999999999999e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_008609  Ppro_1221  methyl-accepting chemotaxis sensory transducer  33.06 
 
 
544 aa  136  9.999999999999999e-31  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000143655  n/a   
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  34.75 
 
 
666 aa  136  1.9999999999999998e-30  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_009654  Mmwyl1_1582  methyl-accepting chemotaxis sensory transducer  29.17 
 
 
678 aa  135  1.9999999999999998e-30  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.85269 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  31.18 
 
 
554 aa  136  1.9999999999999998e-30  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  32.37 
 
 
630 aa  135  1.9999999999999998e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  32.11 
 
 
570 aa  135  1.9999999999999998e-30  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  34.91 
 
 
550 aa  135  1.9999999999999998e-30  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  27.07 
 
 
554 aa  135  1.9999999999999998e-30  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_008789  Hhal_1714  methyl-accepting chemotaxis sensory transducer  33.15 
 
 
673 aa  135  3e-30  Halorhodospira halophila SL1  Bacteria  normal  0.712235  n/a   
 
 
-
 
NC_010506  Swoo_2814  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
702 aa  135  3e-30  Shewanella woodyi ATCC 51908  Bacteria  normal  0.650804  normal 
 
 
-
 
NC_013501  Rmar_2177  methyl-accepting chemotaxis sensory transducer  33.44 
 
 
628 aa  135  3e-30  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  30.25 
 
 
555 aa  134  3.9999999999999996e-30  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  27.39 
 
 
554 aa  134  3.9999999999999996e-30  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  29.89 
 
 
624 aa  134  3.9999999999999996e-30  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1989  methyl-accepting chemotaxis sensory transducer  30.28 
 
 
556 aa  134  3.9999999999999996e-30  Chromohalobacter salexigens DSM 3043  Bacteria  decreased coverage  0.00286784  n/a   
 
 
-
 
NC_008700  Sama_0767  putative methyl-accepting chemotaxis sensory transducer  30.81 
 
 
546 aa  134  5e-30  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3455  methyl-accepting chemotaxis sensory transducer  32.67 
 
 
543 aa  134  5e-30  Shewanella baltica OS185  Bacteria  normal  0.0121993  n/a   
 
 
-
 
NC_007517  Gmet_0821  methyl-accepting chemotaxis sensory transducer  32.44 
 
 
545 aa  134  5e-30  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000877148  hitchhiker  0.00000558474 
 
 
-
 
NC_011663  Sbal223_3382  methyl-accepting chemotaxis sensory transducer  32.67 
 
 
543 aa  134  5e-30  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  31.94 
 
 
558 aa  134  5e-30  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  27.07 
 
 
554 aa  134  5e-30  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_011884  Cyan7425_1064  methyl-accepting chemotaxis sensory transducer with GAF sensor  34.47 
 
 
879 aa  134  5e-30  Cyanothece sp. PCC 7425  Bacteria  normal  0.698769  hitchhiker  0.00000570114 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  30.65 
 
 
554 aa  134  5e-30  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  35.95 
 
 
528 aa  134  6e-30  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_009052  Sbal_0908  methyl-accepting chemotaxis sensory transducer  32.67 
 
 
543 aa  134  6.999999999999999e-30  Shewanella baltica OS155  Bacteria  normal  0.073872  n/a   
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.37 
 
 
554 aa  134  6.999999999999999e-30  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2857  methyl-accepting chemotaxis sensory transducer  31.55 
 
 
520 aa  134  6.999999999999999e-30  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.000607785  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.39 
 
 
554 aa  134  7.999999999999999e-30  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  32.01 
 
 
637 aa  134  7.999999999999999e-30  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_013173  Dbac_1209  methyl-accepting chemotaxis sensory transducer  31.08 
 
 
560 aa  134  9e-30  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0163835  n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  36.18 
 
 
645 aa  133  1.0000000000000001e-29  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  27.42 
 
 
554 aa  133  1.0000000000000001e-29  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  27.97 
 
 
773 aa  133  1.0000000000000001e-29  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_006274  BCZK3093  methyl-accepting chemotaxis protein  31.49 
 
 
576 aa  133  1.0000000000000001e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1510  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.11 
 
 
574 aa  133  1.0000000000000001e-29  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00534894  n/a   
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.94 
 
 
624 aa  133  1.0000000000000001e-29  Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_007517  Gmet_0712  methyl-accepting chemotaxis sensory transducer  32.73 
 
 
550 aa  133  1.0000000000000001e-29  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  34.46 
 
 
627 aa  133  1.0000000000000001e-29  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  32.21 
 
 
637 aa  133  1.0000000000000001e-29  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  30.94 
 
 
633 aa  133  1.0000000000000001e-29  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  31.25 
 
 
639 aa  132  2.0000000000000002e-29  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
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