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3 homologs were found in PanDaTox collection
for query gene
Pput_0677
on replicon NC_009512
Organism:
Pseudomonas putida F1
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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score
E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009512
Pput_0677
100
165 bp
327
5e-88
Pseudomonas putida F1
Bacteria
normal
0.0111171
decreased coverage
0.00465511
-
NC_010501
PputW619_0686
phage integrase
88.2
981 bp
168
2.9999999999999998e-40
Pseudomonas putida W619
Bacteria
hitchhiker
0.00180883
unclonable
0.0000000000000101632
-
NC_010501
PputW619_4936
phage integrase
87.1
981 bp
149
3e-34
Pseudomonas putida W619
Bacteria
normal
0.0598447
hitchhiker
0.0000000940352
-
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