6 homologs were found in PanDaTox collection
for query gene Pput_0296 on replicon NC_009512
Organism: Pseudomonas putida F1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009512  Pput_0296    100 
 
 		 177 bp  351  4e-95  Pseudomonas putida F1  Bacteria  decreased coverage  0.000000000351901  normal  0.157162 
 
 
-
 
NC_009512  Pput_2285  ABC-type branched-chain amino acid transport systems periplasmic component-like protein  91.67 
 
 		 1680 bp  63.9  0.00000001  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_2451  cytochrome c  91.3 
 
 		 1677 bp  60  0.0000002  Pseudomonas putida GB-1  Bacteria  normal  0.131224  normal  1 
 
 
-
 
NC_010501  PputW619_0598  Fis family GAF modulated sigma54 specific transcriptional regulator  92.86 
 
 		 1986 bp  60  0.0000002  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_0231  binding-protein-dependent transport systems inner membrane component  91.11 
 
 		 1605 bp  58  0.0000008  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_4286  rare lipoprotein A  92.5 
 
 		 468 bp  56  0.000003  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
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