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11 homologs were found in PanDaTox collection
for query gene
Pput_0038
on replicon NC_009512
Organism:
Pseudomonas putida F1
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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score
E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009512
Pput_0038
hypothetical protein
100
68 aa
141
3e-33
Pseudomonas putida F1
Bacteria
normal
0.229986
hitchhiker
0.0000929827
-
NC_010322
PputGB1_1626
hypothetical protein
68.85
68 aa
85.9
2e-16
Pseudomonas putida GB-1
Bacteria
normal
1
normal
1
-
NC_009512
Pput_5027
hypothetical protein
50
69 aa
70.1
0.000000000009
Pseudomonas putida F1
Bacteria
normal
1
normal
1
-
NC_010322
PputGB1_2959
hypothetical protein
50
68 aa
70.1
0.00000000001
Pseudomonas putida GB-1
Bacteria
normal
0.100097
normal
1
-
NC_010322
PputGB1_3386
hypothetical protein
58.33
74 aa
62
0.000000003
Pseudomonas putida GB-1
Bacteria
normal
1
hitchhiker
0.000883054
-
NC_009512
Pput_2911
hypothetical protein
70.73
70 aa
60.5
0.000000007
Pseudomonas putida F1
Bacteria
normal
1
normal
1
-
NC_009512
Pput_4094
hypothetical protein
54.17
74 aa
59.7
0.00000001
Pseudomonas putida F1
Bacteria
normal
1
normal
1
-
NC_009512
Pput_3356
hypothetical protein
54.17
74 aa
58.9
0.00000002
Pseudomonas putida F1
Bacteria
normal
1
normal
1
-
NC_002947
PP_3851
hypothetical protein
51.02
107 aa
56.2
0.0000001
Pseudomonas putida KT2440
Bacteria
hitchhiker
0.00188624
normal
0.510213
-
NC_009512
Pput_0037
hypothetical protein
40.82
74 aa
41.2
0.005
Pseudomonas putida F1
Bacteria
normal
0.254213
decreased coverage
0.0000236921
-
NC_010501
PputW619_3368
hypothetical protein
40.74
70 aa
40.8
0.006
Pseudomonas putida W619
Bacteria
normal
0.158598
normal
1
-
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