10 homologs were found in PanDaTox collection
for query gene PputGB1_4746 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010322  PputGB1_4746  restriction endonuclease EcoRII  100 
 
 		 464 aa  950    Pseudomonas putida GB-1  Bacteria  decreased coverage  0.00392459  normal  1 
 
 
-
 
NC_011094  SeSA_A4748  type II restriction enzyme EcoRII  37.41 
 
 		 402 aa  90.1  7e-17  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0131811  normal  0.278195 
 
 
-
 
NC_009832  Spro_0571  Type II site-specific deoxyribonuclease  29.47 
 
 		 404 aa  85.1  0.000000000000003  Serratia proteamaculans 568  Bacteria  normal  0.201389  normal  1 
 
 
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NC_008789  Hhal_0412  type II restriction endonuclease, putative  30.25 
 
 		 411 aa  82.4  0.00000000000001  Halorhodospira halophila SL1  Bacteria  normal  0.135566  n/a   
 
 
-
 
NC_009470  Acry_3581  hypothetical protein  32.88 
 
 		 412 aa  82.8  0.00000000000001  Acidiphilium cryptum JF-5  Bacteria  normal  0.187235  n/a   
 
 
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NC_010814  Glov_0294  Restriction endonuclease EcoRII  25.93 
 
 		 403 aa  81.6  0.00000000000003  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
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NC_009050  Rsph17029_3386  type II restriction endonuclease, putative  31.17 
 
 		 411 aa  79  0.0000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.174346  normal  1 
 
 
-
 
NC_008347  Mmar10_3055  type II restriction endonuclease, putative  31.33 
 
 		 397 aa  75.5  0.000000000002  Maricaulis maris MCS10  Bacteria  normal  0.868824  normal  1 
 
 
-
 
NC_010816  BLD_0355  hypothetical protein  27.31 
 
 		 422 aa  69.7  0.0000000001  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
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NC_012034  Athe_1659  hypothetical protein  29.91 
 
 		 267 aa  49.3  0.0002  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000877289  n/a   
 
 
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