More than 300 homologs were found in PanDaTox collection
for query gene Ppro_3647 on replicon NC_008607
Organism: Pelobacter propionicus DSM 2379



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU1320  sigma-54 dependent DNA-binding response regulator  67.18 
 
 
460 aa  641  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0085  two component, sigma-54 specific, Fis family transcriptional regulator  87.39 
 
 
452 aa  820  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3475  two component, sigma54 specific, transcriptional regulator, Fis family  67.26 
 
 
453 aa  638  Geobacter sp. M21  Bacteria  n/a    normal  0.0804749 
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  66.15 
 
 
454 aa  641  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3740  two component, sigma-54 specific, Fis family transcriptional regulator  69.69 
 
 
454 aa  650  Geobacter uraniireducens Rf4  Bacteria  normal  0.0840186  n/a   
 
 
-
 
NC_011146  Gbem_3413  two component, sigma54 specific, transcriptional regulator, Fis family  67.7 
 
 
453 aa  644  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008607  Ppro_3647  two component, sigma54 specific, Fis family transcriptional regulator  100 
 
 
451 aa  918  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2453  two component, sigma54 specific, Fis family transcriptional regulator  66.22 
 
 
461 aa  607  1e-172  Geobacter metallireducens GS-15  Bacteria  hitchhiker  1.96128e-05  normal 
 
 
-
 
NC_009253  Dred_1510  two component, sigma54 specific, Fis family transcriptional regulator  49.01 
 
 
448 aa  427  1e-118  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2001  two component, sigma54 specific, Fis family transcriptional regulator  49.22 
 
 
454 aa  427  1e-118  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1635  two component, sigma54 specific, transcriptional regulator, Fis family  47.37 
 
 
457 aa  422  1e-117  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2591  two component, sigma54 specific, transcriptional regulator, Fis family  47.59 
 
 
457 aa  420  1e-116  Geobacter bemidjiensis Bem  Bacteria  normal  0.313706  n/a   
 
 
-
 
NC_013216  Dtox_0789  two component, sigma54 specific, transcriptional regulator, Fis family  46.78 
 
 
448 aa  415  1e-115  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1698  two component, sigma54 specific, transcriptional regulator, Fis family  46.22 
 
 
457 aa  412  1e-114  Geobacter sp. M21  Bacteria  n/a    hitchhiker  7.40904e-07 
 
 
-
 
NC_007517  Gmet_0961  two component, sigma54 specific, Fis family transcriptional regulator  46.24 
 
 
454 aa  414  1e-114  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2521  two component, sigma54 specific, transcriptional regulator, Fis family  46.67 
 
 
457 aa  414  1e-114  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2678  two component, sigma-54 specific, Fis family transcriptional regulator  46.15 
 
 
457 aa  409  1e-113  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1495  sigma-54 dependent DNA-binding response regulator  46.83 
 
 
458 aa  409  1e-113  Geobacter sulfurreducens PCA  Bacteria  normal  0.301103  n/a   
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  46.12 
 
 
473 aa  405  1e-112  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  46.34 
 
 
473 aa  407  1e-112  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  46.12 
 
 
473 aa  405  1e-112  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
NC_007517  Gmet_1397  two component, sigma54 specific, Fis family transcriptional regulator  45.61 
 
 
458 aa  405  1e-112  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  46.7 
 
 
457 aa  406  1e-112  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2145  two component signal transduction response regulator  46.56 
 
 
492 aa  402  1e-111  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0812  two component, sigma54 specific, Fis family transcriptional regulator  46.14 
 
 
453 aa  403  1e-111  Geobacter metallireducens GS-15  Bacteria  normal  0.0257022  hitchhiker  3.28811e-06 
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  46.46 
 
 
457 aa  402  1e-111  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1960  response regulator transcription factor  46.27 
 
 
471 aa  405  1e-111  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2245  two component, sigma54 specific, transcriptional regulator, Fis family  45.25 
 
 
460 aa  402  1e-111  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  43.74 
 
 
463 aa  398  1e-110  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_011146  Gbem_3940  two component, sigma54 specific, transcriptional regulator, Fis family  46.64 
 
 
467 aa  399  1e-110  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  6.37809e-05  n/a   
 
 
-
 
NC_008609  Ppro_1179  two component, sigma54 specific, Fis family transcriptional regulator  45.45 
 
 
457 aa  399  1e-110  Pelobacter propionicus DSM 2379  Bacteria  normal  0.655382  n/a   
 
 
-
 
NC_007517  Gmet_3263  two component, sigma54 specific, Fis family transcriptional regulator  46.1 
 
 
464 aa  399  1e-110  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  2.57125e-09 
 
 
-
 
NC_009483  Gura_2914  two component, sigma-54 specific, Fis family transcriptional regulator  46.04 
 
 
459 aa  401  1e-110  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0673  two component, sigma54 specific, transcriptional regulator, Fis family  45.01 
 
 
457 aa  400  1e-110  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3407  two component, sigma54 specific, transcriptional regulator, Fis family  45.49 
 
 
458 aa  399  1e-110  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0673  two component, sigma54 specific, transcriptional regulator, Fis family  45.35 
 
 
458 aa  400  1e-110  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1657  two component, sigma54 specific, transcriptional regulator, Fis family  44.91 
 
 
456 aa  400  1e-110  Geobacter lovleyi SZ  Bacteria  normal  0.0365007  n/a   
 
 
-
 
NC_012918  GM21_4024  two component, sigma54 specific, transcriptional regulator, Fis family  46.64 
 
 
467 aa  399  1e-110  Geobacter sp. M21  Bacteria  n/a    hitchhiker  6.42797e-16 
 
 
-
 
NC_002939  GSU0372  sigma-54 dependent DNA-binding response regulator  45.88 
 
 
461 aa  400  1e-110  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5989  two component, sigma54 specific, transcriptional regulator, Fis family  46.75 
 
 
459 aa  397  1e-109  Haliangium ochraceum DSM 14365  Bacteria  normal  0.999422  normal 
 
 
-
 
NC_009483  Gura_1802  two component, sigma-54 specific, Fis family transcriptional regulator  44.22 
 
 
459 aa  395  1e-109  Geobacter uraniireducens Rf4  Bacteria  normal  0.0135454  n/a   
 
 
-
 
NC_002939  GSU2041  sigma-54 dependent DNA-binding response regulator  44.49 
 
 
455 aa  397  1e-109  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1129  sigma-54 dependent DNA-binding response regulator  45.81 
 
 
453 aa  398  1e-109  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0097  two component, sigma54 specific, transcriptional regulator, Fis family  44.22 
 
 
448 aa  392  1e-108  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4418  two component, sigma-54 specific, Fis family transcriptional regulator  45.84 
 
 
466 aa  393  1e-108  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1951  two component, sigma54 specific, Fis family transcriptional regulator  44.64 
 
 
470 aa  395  1e-108  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.516267  normal 
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  45.37 
 
 
456 aa  389  1e-107  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1013  two component, sigma54 specific, transcriptional regulator, Fis family  44.44 
 
 
456 aa  390  1e-107  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.0616674 
 
 
-
 
NC_013173  Dbac_2984  two component, sigma54 specific, transcriptional regulator, Fis family  45.59 
 
 
458 aa  390  1e-107  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.826768  n/a   
 
 
-
 
NC_013385  Adeg_0173  two component, sigma54 specific, transcriptional regulator, Fis family  46.81 
 
 
463 aa  390  1e-107  Ammonifex degensii KC4  Bacteria  normal  0.127235  n/a   
 
 
-
 
NC_008609  Ppro_3351  two component, sigma54 specific, Fis family transcriptional regulator  45.59 
 
 
465 aa  391  1e-107  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4153  two component, sigma54 specific, transcriptional regulator, Fis family  45.41 
 
 
466 aa  390  1e-107  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.11717 
 
 
-
 
NC_008609  Ppro_1655  two component, sigma54 specific, Fis family transcriptional regulator  45.95 
 
 
462 aa  390  1e-107  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  2.5661e-05  n/a   
 
 
-
 
NC_011146  Gbem_3819  two component, sigma54 specific, transcriptional regulator, Fis family  45.81 
 
 
455 aa  390  1e-107  Geobacter bemidjiensis Bem  Bacteria  normal  0.785821  n/a   
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  46.17 
 
 
458 aa  387  1e-106  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0077  two component, sigma54 specific, transcriptional regulator, Fis family  45.59 
 
 
457 aa  385  1e-106  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  46.17 
 
 
458 aa  388  1e-106  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_007517  Gmet_3158  two component, sigma54 specific, Fis family transcriptional regulator  45.9 
 
 
462 aa  385  1e-106  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2392  two component, sigma54 specific, transcriptional regulator, Fis family  44.32 
 
 
458 aa  387  1e-106  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0321511  normal 
 
 
-
 
NC_009675  Anae109_0684  two component, sigma54 specific, Fis family transcriptional regulator  45.23 
 
 
456 aa  386  1e-106  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2713  two component, sigma54 specific, transcriptional regulator, Fis family  46.89 
 
 
454 aa  387  1e-106  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3903  two component, sigma54 specific, transcriptional regulator, Fis family  45.59 
 
 
455 aa  387  1e-106  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000574971 
 
 
-
 
NC_009483  Gura_3335  two component, sigma-54 specific, Fis family transcriptional regulator  45.32 
 
 
458 aa  388  1e-106  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  42.2 
 
 
461 aa  383  1e-105  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  42.2 
 
 
461 aa  383  1e-105  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  45.62 
 
 
470 aa  384  1e-105  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_013440  Hoch_2280  two component, sigma54 specific, transcriptional regulator, Fis family  43.68 
 
 
453 aa  384  1e-105  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.620123 
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  42.2 
 
 
461 aa  384  1e-105  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  42.2 
 
 
461 aa  383  1e-105  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_012892  B21_02106  hypothetical protein  42.2 
 
 
461 aa  383  1e-105  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  44.03 
 
 
455 aa  384  1e-105  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_009253  Dred_1312  two component, sigma54 specific, Fis family transcriptional regulator  44.27 
 
 
455 aa  380  1e-104  Desulfotomaculum reducens MI-1  Bacteria  normal  0.502008  n/a   
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  41.98 
 
 
461 aa  380  1e-104  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
NC_010571  Oter_1278  two component, sigma54 specific, Fis family transcriptional regulator  43.81 
 
 
452 aa  381  1e-104  Opitutus terrae PB90-1  Bacteria  normal  0.902353  normal 
 
 
-
 
NC_002967  TDE1969  sigma-54 dependent transcriptional regulator/response regulator  43.97 
 
 
473 aa  381  1e-104  Treponema denticola ATCC 35405  Bacteria  normal  0.440374  n/a   
 
 
-
 
NC_007519  Dde_1685  two component Fis family transcriptional regulator  44.44 
 
 
457 aa  381  1e-104  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00529377  n/a   
 
 
-
 
NC_013173  Dbac_2942  two component, sigma54 specific, transcriptional regulator, Fis family  43.46 
 
 
451 aa  379  1e-104  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4192  two component, sigma-54 specific, Fis family transcriptional regulator  44.27 
 
 
454 aa  379  1e-104  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00227342  n/a   
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  45.56 
 
 
470 aa  379  1e-104  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  5.64278e-11 
 
 
-
 
NC_007908  Rfer_2741  two component, sigma54 specific, Fis family transcriptional regulator  44.25 
 
 
474 aa  377  1e-103  Rhodoferax ferrireducens T118  Bacteria  normal  0.0363909  n/a   
 
 
-
 
NC_012918  GM21_0268  two component, sigma54 specific, transcriptional regulator, Fis family  45.37 
 
 
456 aa  377  1e-103  Geobacter sp. M21  Bacteria  n/a    normal  0.0540037 
 
 
-
 
NC_007760  Adeh_0639  two component, sigma54 specific, Fis family transcriptional regulator  45.01 
 
 
455 aa  375  1e-103  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0984  two component, sigma54 specific, Fis family transcriptional regulator  43.33 
 
 
455 aa  375  1e-103  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0283  two component, sigma54 specific, transcriptional regulator, Fis family  45.51 
 
 
456 aa  377  1e-103  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2510  two component, sigma54 specific, transcriptional regulator, Fis family  42.46 
 
 
472 aa  377  1e-103  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0791346  normal 
 
 
-
 
NC_013440  Hoch_0018  two component, sigma54 specific, transcriptional regulator, Fis family  44.57 
 
 
461 aa  377  1e-103  Haliangium ochraceum DSM 14365  Bacteria  normal  0.709029  normal  0.924426 
 
 
-
 
NC_010814  Glov_2158  two component, sigma54 specific, transcriptional regulator, Fis family  42.95 
 
 
453 aa  375  1e-103  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  42.58 
 
 
465 aa  374  1e-102  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2442  two component, sigma54 specific, Fis family transcriptional regulator  42.73 
 
 
480 aa  372  1e-102  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2807  two component, sigma54 specific, Fis family transcriptional regulator  43.3 
 
 
466 aa  372  1e-102  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.75933  n/a   
 
 
-
 
NC_007760  Adeh_4240  two component, sigma54 specific, Fis family transcriptional regulator  44.54 
 
 
469 aa  375  1e-102  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0970  two component, sigma54 specific, transcriptional regulator, Fis family  41.27 
 
 
459 aa  374  1e-102  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000694494  normal  0.524712 
 
 
-
 
NC_010814  Glov_2633  two component, sigma54 specific, transcriptional regulator, Fis family  43.33 
 
 
467 aa  374  1e-102  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3217  sigma-54 dependent DNA-binding response regulator  42.03 
 
 
501 aa  372  1e-102  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3599  two component Fis family transcriptional regulator  44.79 
 
 
459 aa  374  1e-102  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  45.08 
 
 
461 aa  373  1e-102  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_011769  DvMF_0823  two component, sigma54 specific, transcriptional regulator, Fis family  41.93 
 
 
456 aa  374  1e-102  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.449732 
 
 
-
 
NC_011145  AnaeK_4373  two component, sigma54 specific, transcriptional regulator, Fis family  44.32 
 
 
469 aa  370  1e-101  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4396  two component, sigma54 specific, transcriptional regulator, Fis family  44.32 
 
 
469 aa  370  1e-101  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3098  two component, sigma54 specific, transcriptional regulator, Fis family  41.16 
 
 
491 aa  372  1e-101  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
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