More than 300 homologs were found in PanDaTox collection
for query gene Ppro_3480 on replicon NC_008609
Organism: Pelobacter propionicus DSM 2379



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008609  Ppro_3480  response regulator receiver protein  100 
 
 
228 aa  458  9.999999999999999e-129  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.0000540997  n/a   
 
 
-
 
NC_009483  Gura_4270  response regulator receiver modulated metal dependent phosphohydrolase  54.25 
 
 
361 aa  226  3e-58  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3046  response regulator receiver modulated metal dependent phosphohydrolase  51.42 
 
 
365 aa  222  4e-57  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0429754  n/a   
 
 
-
 
NC_002939  GSU1891  response regulator  50.94 
 
 
379 aa  219  1.9999999999999999e-56  Geobacter sulfurreducens PCA  Bacteria  normal  0.750204  n/a   
 
 
-
 
NC_011146  Gbem_0080  response regulator receiver modulated metal dependent phosphohydrolase  54.68 
 
 
357 aa  219  1.9999999999999999e-56  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0063  response regulator receiver modulated metal dependent phosphohydrolase  54.37 
 
 
357 aa  220  1.9999999999999999e-56  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.56416e-22 
 
 
-
 
NC_013552  DhcVS_1406  response regulator  41.54 
 
 
351 aa  150  1e-35  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_3074  response regulator receiver modulated metal dependent phosphohydrolase  37.13 
 
 
363 aa  120  1.9999999999999998e-26  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009675  Anae109_1991  response regulator receiver modulated metal dependent phosphohydrolase  36.84 
 
 
357 aa  117  1.9999999999999998e-25  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_1041  response regulator receiver protein  35.2 
 
 
365 aa  110  2.0000000000000002e-23  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2498  response regulator receiver modulated metal dependent phosphohydrolase  31.66 
 
 
367 aa  109  4.0000000000000004e-23  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.751736 
 
 
-
 
NC_008752  Aave_0230  two component, sigma54 specific, Fis family transcriptional regulator  36.67 
 
 
459 aa  108  8.000000000000001e-23  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  32 
 
 
361 aa  108  1e-22  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_007519  Dde_2457  metal dependent phosphohydrolase  31.19 
 
 
358 aa  106  3e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4294  two component, sigma54 specific, Fis family transcriptional regulator  43.08 
 
 
461 aa  105  4e-22  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.595978 
 
 
-
 
NC_007298  Daro_3285  response regulator receiver  33.77 
 
 
362 aa  105  6e-22  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1811  response regulator receiver modulated metal dependent phosphohydrolase  31.12 
 
 
347 aa  104  1e-21  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00843757 
 
 
-
 
NC_002947  PP_0263  two component, sigma54 specific, transcriptional regulator, Fis family  41.22 
 
 
468 aa  104  1e-21  Pseudomonas putida KT2440  Bacteria  normal  0.513605  normal  0.0177919 
 
 
-
 
NC_007492  Pfl01_0287  two component, sigma-54 specific, Fis family transcriptional regulator  42.31 
 
 
462 aa  103  2e-21  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.378858 
 
 
-
 
NC_010501  PputW619_4947  two component, sigma54 specific, Fis family transcriptional regulator  40.46 
 
 
469 aa  103  2e-21  Pseudomonas putida W619  Bacteria  normal  0.669147  hitchhiker  0.0000241398 
 
 
-
 
NC_007760  Adeh_1829  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  33.16 
 
 
357 aa  103  2e-21  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2031  response regulator receiver modulated metal dependent phosphohydrolase  33.16 
 
 
357 aa  103  2e-21  Anaeromyxobacter sp. K  Bacteria  normal  0.306573  n/a   
 
 
-
 
NC_011891  A2cp1_2101  response regulator receiver modulated metal dependent phosphohydrolase  33.16 
 
 
357 aa  103  2e-21  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_4883  nitrogen regulation protein NR(I)  42.02 
 
 
470 aa  102  4e-21  Serratia proteamaculans 568  Bacteria  normal  0.177074  hitchhiker  0.0000322182 
 
 
-
 
NC_010322  PputGB1_0288  two component, sigma54 specific, Fis family transcriptional regulator  40.46 
 
 
468 aa  102  4e-21  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0278  two component, sigma54 specific, Fis family transcriptional regulator  40.46 
 
 
468 aa  102  4e-21  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1378  response regulator receiver modulated metal dependent phosphohydrolase  30.21 
 
 
348 aa  102  4e-21  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00581699  n/a   
 
 
-
 
NC_011353  ECH74115_5314  nitrogen regulation protein NR(I)  35.12 
 
 
472 aa  102  5e-21  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.111299  normal  0.738695 
 
 
-
 
CP001637  EcDH1_4118  nitrogen metabolism transcriptional regulator, NtrC, Fis Family  35.12 
 
 
469 aa  102  5e-21  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4253  nitrogen regulation protein NR(I)  35.12 
 
 
472 aa  102  5e-21  Escherichia coli SMS-3-5  Bacteria  normal  0.177692  normal  0.167125 
 
 
-
 
NC_011146  Gbem_2407  response regulator receiver modulated metal dependent phosphohydrolase  30.61 
 
 
347 aa  102  5e-21  Geobacter bemidjiensis Bem  Bacteria  normal  0.21688  n/a   
 
 
-
 
NC_007492  Pfl01_4458  two component, sigma-54 specific, Fis family transcriptional regulator  43.7 
 
 
442 aa  102  5e-21  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.741172  normal 
 
 
-
 
CP001509  ECD_03753  fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein  40.77 
 
 
469 aa  102  6e-21  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_4148  nitrogen regulation protein NR(I)  40.77 
 
 
469 aa  102  6e-21  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.221467 
 
 
-
 
NC_010658  SbBS512_E4344  nitrogen regulation protein NR(I)  40.77 
 
 
469 aa  102  6e-21  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4390  nitrogen regulation protein NR(I)  40.77 
 
 
469 aa  102  6e-21  Escherichia coli E24377A  Bacteria  normal  0.127215  n/a   
 
 
-
 
NC_009800  EcHS_A4095  nitrogen regulation protein NR(I)  40.77 
 
 
469 aa  102  6e-21  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03702  hypothetical protein  40.77 
 
 
469 aa  102  6e-21  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4159  nitrogen regulation protein NR(I)  42.02 
 
 
470 aa  101  8e-21  Dickeya zeae Ech1591  Bacteria  normal  0.086406  n/a   
 
 
-
 
NC_009943  Dole_1136  response regulator receiver modulated metal dependent phosphohydrolase  32.54 
 
 
348 aa  101  1e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4216  nitrogen regulation protein NR(I)  40.77 
 
 
469 aa  100  1e-20  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.295301  normal 
 
 
-
 
NC_011083  SeHA_C4333  nitrogen regulation protein NR(I)  40.77 
 
 
469 aa  100  1e-20  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.140715  normal 
 
 
-
 
NC_009483  Gura_2374  response regulator receiver modulated metal dependent phosphohydrolase  32.08 
 
 
348 aa  101  1e-20  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A4287  nitrogen regulation protein NR(I)  40.77 
 
 
469 aa  100  1e-20  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0756679  normal 
 
 
-
 
NC_011149  SeAg_B4237  nitrogen regulation protein NR(I)  40.77 
 
 
469 aa  100  1e-20  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3962  nitrogen regulation protein NR(I)  42.02 
 
 
470 aa  101  1e-20  Dickeya dadantii Ech703  Bacteria  normal  0.389706  n/a   
 
 
-
 
NC_011205  SeD_A4394  nitrogen regulation protein NR(I)  40.77 
 
 
469 aa  100  2e-20  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET0624  response regulator  30.14 
 
 
334 aa  100  2e-20  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1722  two component, sigma54 specific, Fis family transcriptional regulator  36.64 
 
 
455 aa  100  2e-20  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0267167 
 
 
-
 
NC_010524  Lcho_4117  two component, sigma54 specific, Fis family transcriptional regulator  37.89 
 
 
465 aa  99.8  3e-20  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.167574 
 
 
-
 
NC_012917  PC1_4222  nitrogen regulation protein NR(I)  41.18 
 
 
470 aa  99.8  3e-20  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.327829  n/a   
 
 
-
 
NC_013421  Pecwa_4505  nitrogen regulation protein NR(I)  41.18 
 
 
470 aa  99.8  3e-20  Pectobacterium wasabiae WPP163  Bacteria  normal  0.565329  n/a   
 
 
-
 
NC_010172  Mext_1258  sigma-54 factor interaction domain-containing protein  40.74 
 
 
451 aa  99.8  4e-20  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.438925 
 
 
-
 
NC_011757  Mchl_1419  two component, sigma54 specific, transcriptional regulator, Fis family  40.74 
 
 
451 aa  99.8  4e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.895196 
 
 
-
 
NC_008554  Sfum_0643  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
478 aa  99  5e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A0027  nitrogen regulation protein NR(I)  40.34 
 
 
470 aa  99  6e-20  Yersinia pestis Angola  Bacteria  normal  0.307133  normal 
 
 
-
 
NC_007963  Csal_2407  two component, sigma54 specific, Fis family transcriptional regulator  40.46 
 
 
461 aa  98.6  7e-20  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0025  nitrogen regulation protein NR(I)  40.34 
 
 
470 aa  98.6  7e-20  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.151443  n/a   
 
 
-
 
NC_010465  YPK_4191  nitrogen regulation protein NR(I)  40.34 
 
 
470 aa  98.6  7e-20  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.500264  n/a   
 
 
-
 
NC_011146  Gbem_1522  two component, sigma54 specific, transcriptional regulator, Fis family  35.77 
 
 
461 aa  98.2  8e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_565  response regulator receiver:metal-dependent phosphohydrolase, HD subdomain protein  29.67 
 
 
334 aa  98.2  9e-20  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2720  multi-sensor signal transduction histidine kinase  34.09 
 
 
657 aa  97.8  1e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.312815 
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  39.84 
 
 
454 aa  97.8  1e-19  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0677  response regulator receiver modulated metal dependent phosphohydrolase  28.49 
 
 
343 aa  97.8  1e-19  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.756866  n/a   
 
 
-
 
NC_013440  Hoch_2280  two component, sigma54 specific, transcriptional regulator, Fis family  33.85 
 
 
453 aa  98.2  1e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.620123 
 
 
-
 
NC_009436  Ent638_4098  nitrogen regulation protein NR(I)  41.18 
 
 
470 aa  97.8  1e-19  Enterobacter sp. 638  Bacteria  normal  normal  0.797915 
 
 
-
 
NC_013173  Dbac_2325  response regulator receiver modulated metal dependent phosphohydrolase  32.67 
 
 
362 aa  97.8  1e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.663275  n/a   
 
 
-
 
NC_007947  Mfla_0911  two component, sigma54 specific, Fis family transcriptional regulator  33.53 
 
 
456 aa  98.2  1e-19  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1055  two component, sigma54 specific, Fis family transcriptional regulator  33.53 
 
 
456 aa  98.2  1e-19  Methylobacillus flagellatus KT  Bacteria  normal  0.523432  normal 
 
 
-
 
NC_010725  Mpop_1208  two component, sigma54 specific, transcriptional regulator, Fis family  39.69 
 
 
458 aa  97.8  1e-19  Methylobacterium populi BJ001  Bacteria  normal  0.320827  normal  0.373488 
 
 
-
 
NC_012560  Avin_18020  sigma54-dependent response regulator of C4 dicarboxylate transport, two component; DctD  40.77 
 
 
446 aa  97.8  1e-19  Azotobacter vinelandii DJ  Bacteria  normal  0.266513  n/a   
 
 
-
 
NC_002939  GSU1654  response regulator, putative  29.74 
 
 
349 aa  97.4  2e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1745  response regulator receiver sensor signal transduction histidine kinase  30.34 
 
 
417 aa  97.4  2e-19  Geobacter lovleyi SZ  Bacteria  normal  0.0330192  n/a   
 
 
-
 
NC_009783  VIBHAR_00584  response regulator  38.28 
 
 
467 aa  97.1  2e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011369  Rleg2_3169  two component, sigma54 specific, transcriptional regulator, Fis family  36.71 
 
 
444 aa  97.1  2e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.254755  normal  0.187976 
 
 
-
 
NC_012918  GM21_2694  two component, sigma54 specific, transcriptional regulator, Fis family  34.96 
 
 
461 aa  97.4  2e-19  Geobacter sp. M21  Bacteria  n/a    hitchhiker  7.62039e-17 
 
 
-
 
NC_008321  Shewmr4_1359  two component, sigma54 specific, Fis family transcriptional regulator  33.56 
 
 
459 aa  97.4  2e-19  Shewanella sp. MR-4  Bacteria  normal  normal  0.0913399 
 
 
-
 
NC_008322  Shewmr7_1424  two component, sigma54 specific, Fis family transcriptional regulator  33.56 
 
 
459 aa  97.4  2e-19  Shewanella sp. MR-7  Bacteria  normal  normal  0.545985 
 
 
-
 
NC_009438  Sputcn32_2504  two component, sigma54 specific, Fis family transcriptional regulator  34.81 
 
 
459 aa  97.1  2e-19  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1412  two component, sigma54 specific, Fis family transcriptional regulator  33.56 
 
 
459 aa  97.4  2e-19  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_3138  C4-dicarboxylate transport transcriptional regulatory protein  35.11 
 
 
459 aa  96.7  3e-19  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010511  M446_1249  two component, sigma54 specific, Fis family transcriptional regulator  41.18 
 
 
452 aa  96.3  3e-19  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4540  two component, sigma-54 specific, Fis family transcriptional regulator  38.46 
 
 
442 aa  96.7  3e-19  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.203781  normal  0.155775 
 
 
-
 
NC_009620  Smed_4689  two component, sigma54 specific, Fis family transcriptional regulator  42.86 
 
 
447 aa  96.3  4e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.338732 
 
 
-
 
NC_009620  Smed_4176  two component, sigma54 specific, Fis family transcriptional regulator  35.12 
 
 
452 aa  96.3  4e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.280959 
 
 
-
 
NC_008345  Sfri_2719  two component, sigma54 specific, transcriptional regulator, Fis family protein  35.88 
 
 
457 aa  95.9  4e-19  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  39.17 
 
 
451 aa  95.5  6e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_009455  DehaBAV1_0597  response regulator receiver modulated metal dependent phosphohydrolase  29.19 
 
 
334 aa  95.5  6e-19  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_68250  two-component response regulator  34.91 
 
 
462 aa  95.1  8e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.371358  normal  0.144717 
 
 
-
 
NC_013456  VEA_001908  nitrogen regulation protein NR(I)  32.54 
 
 
467 aa  94.7  9e-19  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1483  response regulator receiver modulated diguanylate cyclase  35.86 
 
 
335 aa  94.4  1e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.882912  n/a   
 
 
-
 
NC_009720  Xaut_4048  two component, sigma54 specific, Fis family transcriptional regulator  38.97 
 
 
459 aa  94.4  1e-18  Xanthobacter autotrophicus Py2  Bacteria  normal  0.650008  normal  0.353812 
 
 
-
 
NC_007347  Reut_A0275  helix-turn-helix, Fis-type  40.16 
 
 
441 aa  94.4  1e-18  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1081  two component  36.96 
 
 
441 aa  94.4  1e-18  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.136641  normal  0.653656 
 
 
-
 
NC_009675  Anae109_1798  two component, sigma54 specific, Fis family transcriptional regulator  33.18 
 
 
466 aa  94.7  1e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.634231  normal 
 
 
-
 
NC_013440  Hoch_4444  response regulator receiver modulated metal dependent phosphohydrolase  40 
 
 
526 aa  94.7  1e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0853  two component, sigma54 specific, Fis family transcriptional regulator  35.85 
 
 
502 aa  94.4  1e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3460  two component, sigma54 specific, transcriptional regulator, Fis family  42.02 
 
 
444 aa  94  2e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0376131  normal 
 
 
-
 
NC_007517  Gmet_1919  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  28.95 
 
 
350 aa  93.6  2e-18  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.179225 
 
 
-
 
NC_012560  Avin_03680  C4 dicarboxylate two-component response regulator, sigma54-dependent; DctD2  36.97 
 
 
461 aa  93.6  2e-18  Azotobacter vinelandii DJ  Bacteria  normal  0.0105245  n/a   
 
 
-
 
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