11 homologs were found in PanDaTox collection
for query gene Pnec_0092 on replicon NC_010531
Organism: Polynucleobacter necessarius subsp. necessarius STIR1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010531  Pnec_0092    100 
 
 
818 bp  1622    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.189681  normal  0.764975 
 
 
-
 
NC_009379  Pnuc_0094  glutamate synthase (ferredoxin)  82.22 
 
 
4746 bp  448  1e-123  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  hitchhiker  0.000146352  n/a   
 
 
-
 
BN001305  ANIA_05134  Glutamate synthase Fragment [Source:UniProtKB/TrEMBL;Acc:Q9Y8F4]  85.71 
 
 
7014 bp  71.9  0.0000000003  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_007973  Rmet_3263  glutamate synthase (NADH) large subunit  83.18 
 
 
4896 bp  69.9  0.000000001  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_006679  CNJ02910  glutamate synthase (NADH), putative  86.76 
 
 
7072 bp  63.9  0.00000007  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.844202  n/a   
 
 
-
 
NC_010506  Swoo_1221  glutamate synthase subunit alpha  86.15 
 
 
4449 bp  58  0.000004  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.120556 
 
 
-
 
NC_007347  Reut_A3126  glutamate synthase (NADH) large subunit  81.48 
 
 
4803 bp  56  0.00002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1407  glutamate synthase (NADH) large subunit  96.55 
 
 
4470 bp  50.1  0.001  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1007  glutamate synthase (ferredoxin)  96.55 
 
 
4602 bp  50.1  0.001  Psychromonas ingrahamii 37  Bacteria  normal  0.465703  normal 
 
 
-
 
NC_013061  Phep_2131  Glutamate synthase (ferredoxin)  90.24 
 
 
4509 bp  50.1  0.001  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.150906 
 
 
-
 
NC_011831  Cagg_0145  Glutamate synthase (ferredoxin)  82.5 
 
 
4602 bp  48.1  0.004  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.705237  normal  0.20582 
 
 
-
 
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