198 homologs were found in PanDaTox collection
for query gene Pnap_4730 on replicon NC_008760
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008760  Pnap_4730  histone family protein nucleoid-structuring protein H-NS  100 
 
 
121 aa  241  1.9999999999999999e-63  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.167387  normal 
 
 
-
 
NC_008758  Pnap_4578  histone family protein nucleoid-structuring protein H-NS  94.21 
 
 
121 aa  232  1.0000000000000001e-60  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008757  Pnap_4220  histone family protein nucleoid-structuring protein H-NS  53.28 
 
 
135 aa  128  3e-29  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008760  Pnap_4715  hypothetical protein  77.94 
 
 
78 aa  104  5e-22  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.317009  normal 
 
 
-
 
NC_007948  Bpro_3984  histone-like nucleoid-structuring protein H-NS  38.79 
 
 
117 aa  86.7  9e-17  Polaromonas sp. JS666  Bacteria  normal  0.49889  normal  0.888803 
 
 
-
 
NC_007908  Rfer_3525  histone-like nucleoid-structuring protein H-NS  38.4 
 
 
123 aa  85.5  2e-16  Rhodoferax ferrireducens T118  Bacteria  normal  0.698098  n/a   
 
 
-
 
NC_007348  Reut_B5596  nucleoid protein H-NS  36.04 
 
 
102 aa  74.3  0.0000000000005  Ralstonia eutropha JMP134  Bacteria  normal  0.16143  n/a   
 
 
-
 
NC_012791  Vapar_1795  histone family protein nucleoid-structuring protein H-NS  36.21 
 
 
114 aa  73.9  0.0000000000006  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3677  histone-like nucleoid-structuring protein H-NS  35.14 
 
 
102 aa  72.8  0.000000000001  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.166379 
 
 
-
 
NC_011662  Tmz1t_1136  histone family protein nucleoid-structuring protein H-NS  34.48 
 
 
104 aa  71.6  0.000000000003  Thauera sp. MZ1T  Bacteria  hitchhiker  0.00265311  n/a   
 
 
-
 
NC_008825  Mpe_A3165  putative HNS-like transcription regulator protein  38.74 
 
 
118 aa  68.9  0.00000000002  Methylibium petroleiphilum PM1  Bacteria  normal  hitchhiker  0.00480481 
 
 
-
 
NC_010678  Rpic_4238  histone family protein nucleoid-structuring protein H-NS  30.91 
 
 
102 aa  63.9  0.0000000007  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4348  histone family protein nucleoid-structuring protein H-NS  30.91 
 
 
102 aa  63.9  0.0000000007  Ralstonia pickettii 12D  Bacteria  normal  normal  0.513312 
 
 
-
 
NC_003296  RS02604  putative HNS-like transcription regulator protein  30.43 
 
 
102 aa  63.2  0.000000001  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.00414449  normal  0.0842767 
 
 
-
 
NC_011060  Ppha_1064  histone-like nucleoid-structuring protein H-NS  34.86 
 
 
101 aa  61.6  0.000000003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2867  H-NS histone family protein  36.21 
 
 
98 aa  61.6  0.000000004  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3943  H-NS histone family protein  36.21 
 
 
98 aa  61.6  0.000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0084  H-NS histone family protein  36.21 
 
 
98 aa  61.6  0.000000004  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3109  H-NS histone family protein  36.21 
 
 
98 aa  61.6  0.000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3442  H-NS histone family protein  36.21 
 
 
98 aa  61.6  0.000000004  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1677  H-NS histone family protein  36.21 
 
 
98 aa  61.6  0.000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3862  H-NS histone family protein  36.21 
 
 
98 aa  61.6  0.000000004  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2290  histone family protein nucleoid-structuring protein H-NS  38.18 
 
 
112 aa  61.2  0.000000005  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011353  ECH74115_5080  Ler  32.14 
 
 
123 aa  60.5  0.000000008  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.0343561 
 
 
-
 
NC_010086  Bmul_3806  histone family protein nucleoid-structuring protein H-NS  33.04 
 
 
100 aa  60.1  0.00000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0101066  hitchhiker  0.00273603 
 
 
-
 
NC_012855  Rpic12D_4934  histone family protein nucleoid-structuring protein H-NS  33.94 
 
 
103 aa  58.5  0.00000003  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1598  nucleoid protein H-NS  34.62 
 
 
117 aa  58.5  0.00000003  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008826  Mpe_B0416  nucleoid protein H-NS  32.14 
 
 
114 aa  57.8  0.00000004  Methylibium petroleiphilum PM1  Bacteria  normal  0.0193878  hitchhiker  0.00866736 
 
 
-
 
NC_010524  Lcho_2742  histone family protein nucleoid-structuring protein H-NS  31.93 
 
 
123 aa  57.8  0.00000006  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0000655544 
 
 
-
 
NC_007951  Bxe_A0112  HNS-like transcriptional regulator  35.04 
 
 
100 aa  57.4  0.00000006  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00000000000000994611  normal 
 
 
-
 
NC_010681  Bphyt_3822  histone family protein nucleoid-structuring protein H-NS  35.04 
 
 
100 aa  57  0.00000008  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000137841  normal 
 
 
-
 
NC_010623  Bphy_4285  histone family protein nucleoid-structuring protein H-NS  36.28 
 
 
97 aa  55.5  0.0000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A3351  histone-like nucleoid-structuring protein H-NS  32.76 
 
 
98 aa  55.1  0.0000003  Burkholderia sp. 383  Bacteria  normal  normal  0.383074 
 
 
-
 
NC_008759  Pnap_4886  histone family protein nucleoid-structuring protein H-NS  33.87 
 
 
114 aa  55.5  0.0000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.602991  normal 
 
 
-
 
NC_010553  BamMC406_6743  histone family protein nucleoid-structuring protein H-NS  36.52 
 
 
108 aa  54.3  0.0000006  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0231  histone family protein nucleoid-structuring protein H-NS  33.62 
 
 
98 aa  54.3  0.0000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2858  histone-like nucleoid-structuring protein H-NS  33.62 
 
 
98 aa  54.3  0.0000006  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.259744  n/a   
 
 
-
 
NC_008542  Bcen2424_0249  histone family protein nucleoid-structuring protein H-NS  33.62 
 
 
98 aa  54.3  0.0000006  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3189  H-NS histone family protein  32.76 
 
 
98 aa  53.5  0.0000009  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS00711  putative HNS-like transcription regulator protein  33.63 
 
 
96 aa  53.5  0.000001  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000172984  normal 
 
 
-
 
NC_007511  Bcep18194_B1833  histone-like nucleoid-structuring protein H-NS  31.36 
 
 
96 aa  52.8  0.000001  Burkholderia sp. 383  Bacteria  normal  0.648369  normal  0.932582 
 
 
-
 
NC_010622  Bphy_0116  histone family protein nucleoid-structuring protein H-NS  34.48 
 
 
100 aa  53.1  0.000001  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012849  Rpic12D_5155  histone family protein nucleoid-structuring protein H-NS  28.95 
 
 
97 aa  52.4  0.000002  Ralstonia pickettii 12D  Bacteria  normal  0.336859  normal  0.425922 
 
 
-
 
NC_007348  Reut_B4990  histone-like nucleoid-structuring protein H-NS  34.69 
 
 
104 aa  52.4  0.000002  Ralstonia eutropha JMP134  Bacteria  normal  0.0212879  n/a   
 
 
-
 
NC_007952  Bxe_B2975  putative H-NS-like transcription regulator  31.03 
 
 
96 aa  52  0.000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6382  histone family protein nucleoid-structuring protein H-NS  33.9 
 
 
99 aa  52.4  0.000002  Burkholderia ambifaria AMMD  Bacteria  normal  0.193522  normal  0.0275568 
 
 
-
 
NC_010002  Daci_2158  histone family protein nucleoid-structuring protein H-NS  36.63 
 
 
96 aa  52.4  0.000002  Delftia acidovorans SPH-1  Bacteria  normal  0.232102  normal  0.811955 
 
 
-
 
NC_010557  BamMC406_6084  histone family protein nucleoid-structuring protein H-NS  34.17 
 
 
99 aa  52.4  0.000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.78955  normal 
 
 
-
 
NC_010803  Clim_0490  hypothetical protein  27.83 
 
 
125 aa  51.6  0.000003  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_010087  Bmul_5701  histone family protein nucleoid-structuring protein H-NS  38.83 
 
 
94 aa  51.6  0.000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0175  histone family protein nucleoid-structuring protein H-NS  31.9 
 
 
98 aa  52  0.000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0162  histone family protein nucleoid-structuring protein H-NS  31.9 
 
 
98 aa  52  0.000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.121985  n/a   
 
 
-
 
NC_010676  Bphyt_6934  histone family protein nucleoid-structuring protein H-NS  33.64 
 
 
96 aa  51.6  0.000004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.909068  normal 
 
 
-
 
NC_010678  Rpic_4798  histone family protein nucleoid-structuring protein H-NS  31.36 
 
 
96 aa  50.8  0.000005  Ralstonia pickettii 12J  Bacteria  normal  0.272454  normal  0.166506 
 
 
-
 
NC_012857  Rpic12D_3721  histone family protein nucleoid-structuring protein H-NS  31.36 
 
 
96 aa  50.8  0.000005  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.00112888  normal  0.513312 
 
 
-
 
NC_010084  Bmul_0158  histone family protein nucleoid-structuring protein H-NS  32.76 
 
 
98 aa  51.2  0.000005  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010553  BamMC406_6696  histone family protein nucleoid-structuring protein H-NS  38.04 
 
 
98 aa  50.8  0.000005  Burkholderia ambifaria MC40-6  Bacteria  normal  0.685774  normal  0.68943 
 
 
-
 
NC_009080  BMA10247_2965  H-NS histone family protein  31.93 
 
 
97 aa  49.7  0.00001  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2905  H-NS histone family protein  31.93 
 
 
97 aa  49.7  0.00001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010070  Bmul_6182  hypothetical protein  33.33 
 
 
159 aa  49.7  0.00001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.633203  normal  0.361807 
 
 
-
 
NC_007434  BURPS1710b_0048  H-NS histone family protein  31.93 
 
 
125 aa  49.7  0.00001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3155  H-NS histone family protein  31.93 
 
 
97 aa  49.7  0.00001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1065  histone family protein nucleoid-structuring protein H-NS  32.67 
 
 
98 aa  50.1  0.00001  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6772  histone family protein nucleoid-structuring protein H-NS  31.97 
 
 
254 aa  50.1  0.00001  Burkholderia phymatum STM815  Bacteria  decreased coverage  0.000000111168  normal  0.0541472 
 
 
-
 
NC_009076  BURPS1106A_3909  H-NS histone family protein  31.93 
 
 
97 aa  49.7  0.00001  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010087  Bmul_5655  histone family protein nucleoid-structuring protein H-NS  36.26 
 
 
128 aa  49.7  0.00001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1144  histone family protein nucleoid-structuring protein H-NS  32.67 
 
 
98 aa  50.1  0.00001  Acidovorax sp. JS42  Bacteria  normal  0.439674  normal  0.582774 
 
 
-
 
NC_008785  BMASAVP1_A3404  H-NS histone family protein  31.93 
 
 
97 aa  49.7  0.00001  Burkholderia mallei SAVP1  Bacteria  normal  0.237819  n/a   
 
 
-
 
NC_008836  BMA10229_A1636  H-NS histone family protein  31.93 
 
 
97 aa  49.7  0.00001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.741416  n/a   
 
 
-
 
NC_009074  BURPS668_3827  H-NS histone family protein  31.93 
 
 
97 aa  49.7  0.00001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2060  histone family protein nucleoid-structuring protein H-NS  30.17 
 
 
91 aa  48.9  0.00002  Thauera sp. MZ1T  Bacteria  normal  0.0796579  n/a   
 
 
-
 
NC_007511  Bcep18194_B0132  histone-like nucleoid-structuring protein H-NS  30.7 
 
 
99 aa  48.5  0.00003  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007801  Jann_4229  histone-like nucleoid-structuring protein H-NS  51.06 
 
 
108 aa  48.5  0.00003  Jannaschia sp. CCS1  Bacteria  normal  0.289876  normal 
 
 
-
 
NC_007964  Nham_3069  histone-like nucleoid-structuring protein H-NS  34.19 
 
 
130 aa  48.5  0.00003  Nitrobacter hamburgensis X14  Bacteria  normal  0.39515  n/a   
 
 
-
 
NC_007974  Rmet_5562  histone-like nucleoid-structuring protein H-NS  29.25 
 
 
104 aa  48.1  0.00004  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2981  histone family protein nucleoid-structuring protein H-NS  34.45 
 
 
100 aa  48.1  0.00004  Burkholderia phymatum STM815  Bacteria  normal  0.207499  decreased coverage  0.0000000417224 
 
 
-
 
NC_007510  Bcep18194_A3384  histone-like nucleoid-structuring protein H-NS  31.93 
 
 
97 aa  47.8  0.00005  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0263  histone family protein nucleoid-structuring protein H-NS  31.93 
 
 
97 aa  47.8  0.00005  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.820493 
 
 
-
 
NC_008060  Bcen_2825  histone-like nucleoid-structuring protein H-NS  31.93 
 
 
97 aa  47.8  0.00005  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0195  histone family protein nucleoid-structuring protein H-NS  31.93 
 
 
97 aa  47.8  0.00005  Burkholderia ambifaria AMMD  Bacteria  normal  0.750004  n/a   
 
 
-
 
NC_008542  Bcen2424_0281  histone family protein nucleoid-structuring protein H-NS  31.93 
 
 
97 aa  47.8  0.00005  Burkholderia cenocepacia HI2424  Bacteria  normal  0.166699  n/a   
 
 
-
 
NC_010551  BamMC406_0209  histone family protein nucleoid-structuring protein H-NS  31.93 
 
 
97 aa  47.8  0.00005  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.726678 
 
 
-
 
NC_010513  Xfasm12_1793  DNA-binding protein  37.04 
 
 
124 aa  47.8  0.00006  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II2010  H-NS histone family protein  32.29 
 
 
99 aa  47.8  0.00006  Burkholderia thailandensis E264  Bacteria  normal  0.0227527  n/a   
 
 
-
 
NC_010577  XfasM23_1726  histone family protein nucleoid-structuring protein H-NS  37.04 
 
 
124 aa  47.8  0.00006  Xylella fastidiosa M23  Bacteria  normal  0.442577  n/a   
 
 
-
 
NC_008545  Bcen2424_6922  histone family protein nucleoid-structuring protein H-NS  29.31 
 
 
100 aa  47.4  0.00006  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3493  histone family protein nucleoid-structuring protein H-NS  30.4 
 
 
113 aa  47.4  0.00006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.572012  normal  0.600215 
 
 
-
 
NC_010084  Bmul_0190  histone family protein nucleoid-structuring protein H-NS  31.93 
 
 
97 aa  47.4  0.00007  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.317548  hitchhiker  0.0000000190695 
 
 
-
 
NC_008825  Mpe_A1370  nucleoid protein H-NS  31.9 
 
 
115 aa  47.4  0.00007  Methylibium petroleiphilum PM1  Bacteria  normal  0.620152  normal 
 
 
-
 
NC_006349  BMAA0365  H-NS histone family protein  33.33 
 
 
96 aa  46.6  0.0001  Burkholderia mallei ATCC 23344  Bacteria  decreased coverage  0.00000040716  n/a   
 
 
-
 
NC_010087  Bmul_5767  histone family protein nucleoid-structuring protein H-NS  35.42 
 
 
99 aa  46.6  0.0001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A1239  H-NS histone family protein  33.33 
 
 
96 aa  46.6  0.0001  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.0000000000958752  n/a   
 
 
-
 
NC_009079  BMA10247_A0401  H-NS histone family protein  33.33 
 
 
96 aa  46.6  0.0001  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.000000304691  n/a   
 
 
-
 
NC_007650  BTH_II2207  H-NS histone family protein  33.33 
 
 
96 aa  46.2  0.0001  Burkholderia thailandensis E264  Bacteria  decreased coverage  0.0000000000144624  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2886  H-NS histone family protein  33.33 
 
 
96 aa  46.6  0.0001  Burkholderia pseudomallei 1106a  Bacteria  hitchhiker  0.000145694  n/a   
 
 
-
 
NC_010512  Bcenmc03_6755  histone family protein nucleoid-structuring protein H-NS  31.3 
 
 
113 aa  46.6  0.0001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.13631  normal 
 
 
-
 
NC_009075  BURPS668_A3002  H-NS histone family protein  33.33 
 
 
96 aa  46.6  0.0001  Burkholderia pseudomallei 668  Bacteria  unclonable  0.00000000000000136233  n/a   
 
 
-
 
NC_008752  Aave_1150  histone family protein nucleoid-structuring protein H-NS  30.7 
 
 
99 aa  46.6  0.0001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008784  BMASAVP1_1551  H-NS histone family protein  33.33 
 
 
96 aa  46.6  0.0001  Burkholderia mallei SAVP1  Bacteria  unclonable  0.0000000000000358636  n/a   
 
 
-
 
NC_008835  BMA10229_1739  H-NS histone family protein  33.33 
 
 
96 aa  46.6  0.0001  Burkholderia mallei NCTC 10229  Bacteria  unclonable  0.00000000000000443719  n/a   
 
 
-
 
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