257 homologs were found in PanDaTox collection
for query gene Pnap_3493 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008781  Pnap_3493  histone family protein nucleoid-structuring protein H-NS  100 
 
 
113 aa  231  3e-60  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.572012  normal  0.600215 
 
 
-
 
NC_008759  Pnap_4886  histone family protein nucleoid-structuring protein H-NS  68.14 
 
 
114 aa  151  2.9999999999999998e-36  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.602991  normal 
 
 
-
 
NC_011662  Tmz1t_1136  histone family protein nucleoid-structuring protein H-NS  39.64 
 
 
104 aa  81.6  0.000000000000004  Thauera sp. MZ1T  Bacteria  hitchhiker  0.00265311  n/a   
 
 
-
 
NC_007952  Bxe_B2975  putative H-NS-like transcription regulator  43.3 
 
 
96 aa  77.8  0.00000000000004  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6934  histone family protein nucleoid-structuring protein H-NS  41.24 
 
 
96 aa  77.8  0.00000000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.909068  normal 
 
 
-
 
NC_010623  Bphy_4285  histone family protein nucleoid-structuring protein H-NS  39.58 
 
 
97 aa  76.6  0.00000000000009  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3677  histone-like nucleoid-structuring protein H-NS  43.75 
 
 
102 aa  76.6  0.0000000000001  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.166379 
 
 
-
 
NC_012857  Rpic12D_4348  histone family protein nucleoid-structuring protein H-NS  44.79 
 
 
102 aa  75.5  0.0000000000002  Ralstonia pickettii 12D  Bacteria  normal  normal  0.513312 
 
 
-
 
NC_010678  Rpic_4238  histone family protein nucleoid-structuring protein H-NS  44.79 
 
 
102 aa  75.5  0.0000000000002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012849  Rpic12D_5155  histone family protein nucleoid-structuring protein H-NS  44.9 
 
 
97 aa  75.9  0.0000000000002  Ralstonia pickettii 12D  Bacteria  normal  0.336859  normal  0.425922 
 
 
-
 
NC_007348  Reut_B5596  nucleoid protein H-NS  43.75 
 
 
102 aa  73.9  0.0000000000006  Ralstonia eutropha JMP134  Bacteria  normal  0.16143  n/a   
 
 
-
 
NC_010552  BamMC406_4070  histone family protein nucleoid-structuring protein H-NS  36.54 
 
 
95 aa  73.6  0.0000000000009  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.000676326  normal 
 
 
-
 
NC_008391  Bamb_3595  histone family protein nucleoid-structuring protein H-NS  36.54 
 
 
95 aa  73.6  0.000000000001  Burkholderia ambifaria AMMD  Bacteria  normal  0.137974  normal 
 
 
-
 
NC_007951  Bxe_A0112  HNS-like transcriptional regulator  40.2 
 
 
100 aa  72.8  0.000000000002  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00000000000000994611  normal 
 
 
-
 
NC_010681  Bphyt_3822  histone family protein nucleoid-structuring protein H-NS  39.22 
 
 
100 aa  72  0.000000000003  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000137841  normal 
 
 
-
 
NC_007511  Bcep18194_B1833  histone-like nucleoid-structuring protein H-NS  37.5 
 
 
96 aa  71.6  0.000000000004  Burkholderia sp. 383  Bacteria  normal  0.648369  normal  0.932582 
 
 
-
 
NC_009379  Pnuc_0838  histone family protein nucleoid-structuring protein H-NS  44.79 
 
 
94 aa  71.6  0.000000000004  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_012855  Rpic12D_4689  histone family protein nucleoid-structuring protein H-NS  38.3 
 
 
92 aa  71.2  0.000000000005  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_2158  histone family protein nucleoid-structuring protein H-NS  42.39 
 
 
96 aa  69.7  0.00000000001  Delftia acidovorans SPH-1  Bacteria  normal  0.232102  normal  0.811955 
 
 
-
 
NC_007650  BTH_II1558  H-NS histone family protein  39.58 
 
 
131 aa  70.1  0.00000000001  Burkholderia thailandensis E264  Bacteria  normal  0.752713  n/a   
 
 
-
 
NC_010524  Lcho_2290  histone family protein nucleoid-structuring protein H-NS  36.61 
 
 
112 aa  69.7  0.00000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012855  Rpic12D_4934  histone family protein nucleoid-structuring protein H-NS  36.54 
 
 
103 aa  68.9  0.00000000002  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A1239  H-NS histone family protein  38.14 
 
 
96 aa  68.6  0.00000000003  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.0000000000958752  n/a   
 
 
-
 
NC_008835  BMA10229_1739  H-NS histone family protein  38.14 
 
 
96 aa  68.6  0.00000000003  Burkholderia mallei NCTC 10229  Bacteria  unclonable  0.00000000000000443719  n/a   
 
 
-
 
NC_009079  BMA10247_A0401  H-NS histone family protein  38.14 
 
 
96 aa  68.6  0.00000000003  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.000000304691  n/a   
 
 
-
 
NC_008784  BMASAVP1_1551  H-NS histone family protein  38.14 
 
 
96 aa  68.6  0.00000000003  Burkholderia mallei SAVP1  Bacteria  unclonable  0.0000000000000358636  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2886  H-NS histone family protein  38.14 
 
 
96 aa  68.6  0.00000000003  Burkholderia pseudomallei 1106a  Bacteria  hitchhiker  0.000145694  n/a   
 
 
-
 
NC_009075  BURPS668_A3002  H-NS histone family protein  38.14 
 
 
96 aa  68.6  0.00000000003  Burkholderia pseudomallei 668  Bacteria  unclonable  0.00000000000000136233  n/a   
 
 
-
 
NC_003296  RS02604  putative HNS-like transcription regulator protein  41.67 
 
 
102 aa  67.8  0.00000000005  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.00414449  normal  0.0842767 
 
 
-
 
NC_006348  BMA2867  H-NS histone family protein  35.96 
 
 
98 aa  67.4  0.00000000007  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1795  histone family protein nucleoid-structuring protein H-NS  38.53 
 
 
114 aa  67  0.00000000007  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0084  H-NS histone family protein  35.96 
 
 
98 aa  67.4  0.00000000007  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1677  H-NS histone family protein  35.96 
 
 
98 aa  67.4  0.00000000007  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3442  H-NS histone family protein  35.96 
 
 
98 aa  67.4  0.00000000007  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3943  H-NS histone family protein  35.96 
 
 
98 aa  67.4  0.00000000007  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3109  H-NS histone family protein  35.96 
 
 
98 aa  67.4  0.00000000007  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3862  H-NS histone family protein  35.96 
 
 
98 aa  67.4  0.00000000007  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS02004  putative HNS-like transcription regulator protein  37.11 
 
 
95 aa  66.6  0.0000000001  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0969964  normal 
 
 
-
 
NC_007650  BTH_II2207  H-NS histone family protein  37.11 
 
 
96 aa  66.2  0.0000000001  Burkholderia thailandensis E264  Bacteria  decreased coverage  0.0000000000144624  n/a   
 
 
-
 
NC_010508  Bcenmc03_0231  histone family protein nucleoid-structuring protein H-NS  36.61 
 
 
98 aa  66.6  0.0000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4935  putative H-NS histon-like DNA-binding protein  33.62 
 
 
104 aa  66.2  0.0000000001  Cupriavidus metallidurans CH34  Bacteria  normal  0.529231  normal  0.833407 
 
 
-
 
NC_008060  Bcen_2858  histone-like nucleoid-structuring protein H-NS  36.61 
 
 
98 aa  66.6  0.0000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.259744  n/a   
 
 
-
 
NC_008542  Bcen2424_0249  histone family protein nucleoid-structuring protein H-NS  36.61 
 
 
98 aa  66.6  0.0000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0867  putative HNS-like transcription regulator protein  34.78 
 
 
96 aa  65.5  0.0000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.139885 
 
 
-
 
NC_006349  BMAA0365  H-NS histone family protein  37.11 
 
 
96 aa  65.5  0.0000000002  Burkholderia mallei ATCC 23344  Bacteria  decreased coverage  0.00000040716  n/a   
 
 
-
 
NC_011992  Dtpsy_1065  histone family protein nucleoid-structuring protein H-NS  41 
 
 
98 aa  66.2  0.0000000002  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0116  histone family protein nucleoid-structuring protein H-NS  38.14 
 
 
100 aa  65.5  0.0000000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0175  histone family protein nucleoid-structuring protein H-NS  36.61 
 
 
98 aa  65.5  0.0000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1144  histone family protein nucleoid-structuring protein H-NS  41 
 
 
98 aa  66.2  0.0000000002  Acidovorax sp. JS42  Bacteria  normal  0.439674  normal  0.582774 
 
 
-
 
NC_010682  Rpic_1730  histone family protein nucleoid-structuring protein H-NS  48 
 
 
72 aa  65.9  0.0000000002  Ralstonia pickettii 12J  Bacteria  normal  0.386763  normal  0.64236 
 
 
-
 
NC_008390  Bamb_0162  histone family protein nucleoid-structuring protein H-NS  36.61 
 
 
98 aa  65.5  0.0000000002  Burkholderia ambifaria AMMD  Bacteria  normal  0.121985  n/a   
 
 
-
 
NC_007434  BURPS1710b_0048  H-NS histone family protein  36.45 
 
 
125 aa  65.1  0.0000000003  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3351  histone-like nucleoid-structuring protein H-NS  36.61 
 
 
98 aa  64.3  0.0000000005  Burkholderia sp. 383  Bacteria  normal  normal  0.383074 
 
 
-
 
NC_007511  Bcep18194_B0132  histone-like nucleoid-structuring protein H-NS  38.14 
 
 
99 aa  64.7  0.0000000005  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0158  histone family protein nucleoid-structuring protein H-NS  35.4 
 
 
98 aa  64.3  0.0000000006  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3279  histone family protein nucleoid-structuring protein H-NS  32.43 
 
 
97 aa  63.9  0.0000000007  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0515948 
 
 
-
 
NC_008752  Aave_1150  histone family protein nucleoid-structuring protein H-NS  35.45 
 
 
99 aa  62.8  0.000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2905  H-NS histone family protein  38.38 
 
 
97 aa  63.5  0.000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1636  H-NS histone family protein  38.38 
 
 
97 aa  63.5  0.000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.741416  n/a   
 
 
-
 
NC_009074  BURPS668_3827  H-NS histone family protein  38.38 
 
 
97 aa  63.5  0.000000001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2965  H-NS histone family protein  38.38 
 
 
97 aa  63.5  0.000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4714  histone family protein nucleoid-structuring protein H-NS  38.24 
 
 
98 aa  62.8  0.000000001  Delftia acidovorans SPH-1  Bacteria  normal  0.991534  normal  0.729946 
 
 
-
 
NC_007651  BTH_I3155  H-NS histone family protein  38.38 
 
 
97 aa  63.5  0.000000001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3909  H-NS histone family protein  38.38 
 
 
97 aa  63.5  0.000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3404  H-NS histone family protein  38.38 
 
 
97 aa  63.5  0.000000001  Burkholderia mallei SAVP1  Bacteria  normal  0.237819  n/a   
 
 
-
 
NC_003296  RS00711  putative HNS-like transcription regulator protein  39 
 
 
96 aa  62.8  0.000000002  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000172984  normal 
 
 
-
 
NC_010622  Bphy_2981  histone family protein nucleoid-structuring protein H-NS  36.27 
 
 
100 aa  62  0.000000002  Burkholderia phymatum STM815  Bacteria  normal  0.207499  decreased coverage  0.0000000417224 
 
 
-
 
NC_007510  Bcep18194_A3384  histone-like nucleoid-structuring protein H-NS  36.36 
 
 
97 aa  61.6  0.000000003  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1370  nucleoid protein H-NS  33.91 
 
 
115 aa  61.6  0.000000003  Methylibium petroleiphilum PM1  Bacteria  normal  0.620152  normal 
 
 
-
 
NC_011662  Tmz1t_2060  histone family protein nucleoid-structuring protein H-NS  36.63 
 
 
91 aa  61.6  0.000000004  Thauera sp. MZ1T  Bacteria  normal  0.0796579  n/a   
 
 
-
 
NC_007651  BTH_I2714  DNA-binding protein BprA  31.07 
 
 
111 aa  61.2  0.000000004  Burkholderia thailandensis E264  Bacteria  normal  0.344106  n/a   
 
 
-
 
NC_008392  Bamb_6382  histone family protein nucleoid-structuring protein H-NS  37 
 
 
99 aa  61.6  0.000000004  Burkholderia ambifaria AMMD  Bacteria  normal  0.193522  normal  0.0275568 
 
 
-
 
NC_010002  Daci_1913  histone family protein nucleoid-structuring protein H-NS  38.14 
 
 
95 aa  60.8  0.000000005  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00000000183319 
 
 
-
 
NC_010557  BamMC406_6084  histone family protein nucleoid-structuring protein H-NS  37 
 
 
99 aa  60.8  0.000000005  Burkholderia ambifaria MC40-6  Bacteria  normal  0.78955  normal 
 
 
-
 
NC_010002  Daci_4128  histone family protein nucleoid-structuring protein H-NS  38.14 
 
 
95 aa  60.8  0.000000005  Delftia acidovorans SPH-1  Bacteria  normal  0.382519  hitchhiker  0.00000000510411 
 
 
-
 
NC_010508  Bcenmc03_0263  histone family protein nucleoid-structuring protein H-NS  35.35 
 
 
97 aa  60.5  0.000000007  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.820493 
 
 
-
 
NC_010515  Bcenmc03_4746  histone family protein nucleoid-structuring protein H-NS  34.69 
 
 
101 aa  60.5  0.000000007  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.587516  normal 
 
 
-
 
NC_006349  BMAA0720  H-NS histone family protein  34.38 
 
 
96 aa  60.8  0.000000007  Burkholderia mallei ATCC 23344  Bacteria  normal  0.232457  n/a   
 
 
-
 
NC_009075  BURPS668_A1247  H-NS histone family protein  34.38 
 
 
96 aa  60.8  0.000000007  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0742  H-NS histone family protein  34.38 
 
 
104 aa  60.5  0.000000007  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1174  H-NS histone family protein  34.38 
 
 
104 aa  60.5  0.000000007  Burkholderia pseudomallei 1106a  Bacteria  normal  0.354816  n/a   
 
 
-
 
NC_008060  Bcen_2825  histone-like nucleoid-structuring protein H-NS  35.35 
 
 
97 aa  60.5  0.000000007  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_5335  histone-like nucleoid-structuring protein H-NS  34.69 
 
 
101 aa  60.5  0.000000007  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1706  H-NS histone family protein  34.38 
 
 
104 aa  60.5  0.000000007  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0281  histone family protein nucleoid-structuring protein H-NS  35.35 
 
 
97 aa  60.5  0.000000007  Burkholderia cenocepacia HI2424  Bacteria  normal  0.166699  n/a   
 
 
-
 
NC_008543  Bcen2424_5527  histone family protein nucleoid-structuring protein H-NS  34.69 
 
 
101 aa  60.5  0.000000007  Burkholderia cenocepacia HI2424  Bacteria  normal  0.645148  normal 
 
 
-
 
NC_010002  Daci_3934  histone family protein nucleoid-structuring protein H-NS  36.46 
 
 
91 aa  60.5  0.000000008  Delftia acidovorans SPH-1  Bacteria  normal  0.222409  normal  0.184824 
 
 
-
 
NC_010002  Daci_3476  histone family protein nucleoid-structuring protein H-NS  38.24 
 
 
97 aa  60.1  0.000000009  Delftia acidovorans SPH-1  Bacteria  normal  0.634664  normal 
 
 
-
 
NC_010084  Bmul_0190  histone family protein nucleoid-structuring protein H-NS  35.35 
 
 
97 aa  60.1  0.00000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.317548  hitchhiker  0.0000000190695 
 
 
-
 
NC_012849  Rpic12D_5158  histone family protein nucleoid-structuring protein H-NS  36.23 
 
 
97 aa  59.7  0.00000001  Ralstonia pickettii 12D  Bacteria  normal  0.521264  normal  0.418842 
 
 
-
 
NC_007435  BURPS1710b_A2442  H-NS histone family protein  34.38 
 
 
131 aa  60.1  0.00000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4798  histone family protein nucleoid-structuring protein H-NS  37 
 
 
96 aa  59.7  0.00000001  Ralstonia pickettii 12J  Bacteria  normal  0.272454  normal  0.166506 
 
 
-
 
NC_012857  Rpic12D_3721  histone family protein nucleoid-structuring protein H-NS  37 
 
 
96 aa  59.7  0.00000001  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.00112888  normal  0.513312 
 
 
-
 
NC_007651  BTH_I3189  H-NS histone family protein  36.84 
 
 
98 aa  60.1  0.00000001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6005  histone-like nucleoid-structuring protein H-NS  32.74 
 
 
103 aa  58.9  0.00000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0195  histone family protein nucleoid-structuring protein H-NS  34.34 
 
 
97 aa  59.3  0.00000002  Burkholderia ambifaria AMMD  Bacteria  normal  0.750004  n/a   
 
 
-
 
NC_010551  BamMC406_0209  histone family protein nucleoid-structuring protein H-NS  34.34 
 
 
97 aa  59.3  0.00000002  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.726678 
 
 
-
 
NC_007348  Reut_B4990  histone-like nucleoid-structuring protein H-NS  32.76 
 
 
104 aa  58.5  0.00000003  Ralstonia eutropha JMP134  Bacteria  normal  0.0212879  n/a   
 
 
-
 
NC_010553  BamMC406_6696  histone family protein nucleoid-structuring protein H-NS  39.74 
 
 
98 aa  58.5  0.00000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.685774  normal  0.68943 
 
 
-
 
NC_007951  Bxe_A4321  putative HNS-like transcriptional regulator  38.14 
 
 
100 aa  58.2  0.00000004  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
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