More than 300 homologs were found in PanDaTox collection
for query gene Pnap_1327 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008781  Pnap_1327  BadM/Rrf2 family transcriptional regulator  100 
 
 
168 aa  348  2e-95  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.679067  normal  0.833541 
 
 
-
 
NC_007404  Tbd_2014  BadM/Rrf2 family transcriptional regulator  61.01 
 
 
156 aa  192  2e-48  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3286  transcriptional regulator, BadM/Rrf2 family  55.56 
 
 
159 aa  153  1e-36  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3608  transcriptional regulator, BadM/Rrf2 family  55.56 
 
 
159 aa  152  2e-36  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3163  BadM/Rrf2 family transcriptional regulator  49.39 
 
 
166 aa  150  1e-35  Acidovorax sp. JS42  Bacteria  normal  0.878205  normal 
 
 
-
 
NC_011992  Dtpsy_2510  transcriptional regulator, BadM/Rrf2 family  48.78 
 
 
166 aa  149  2e-35  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc3397  hypothetical protein  49.68 
 
 
172 aa  146  1.0000000000000001e-34  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0908  transcriptional regulator, BadM/Rrf2 family  46.91 
 
 
160 aa  144  7.0000000000000006e-34  Methylobacterium populi BJ001  Bacteria  normal  0.459375  normal  0.322179 
 
 
-
 
NC_007298  Daro_2918  BadM/Rrf2 family transcriptional regulator  52.94 
 
 
159 aa  144  8.000000000000001e-34  Dechloromonas aromatica RCB  Bacteria  normal  0.996999  normal  0.248939 
 
 
-
 
NC_011757  Mchl_0932  transcriptional regulator, BadM/Rrf2 family  52.24 
 
 
157 aa  139  1.9999999999999998e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.193956 
 
 
-
 
NC_007651  BTH_I1790  Rrf2 family protein  50.39 
 
 
164 aa  139  1.9999999999999998e-32  Burkholderia thailandensis E264  Bacteria  normal  0.034935  n/a   
 
 
-
 
NC_010172  Mext_0968  rrf2 family transcriptional regulator  52.24 
 
 
157 aa  139  1.9999999999999998e-32  Methylobacterium extorquens PA1  Bacteria  normal  0.438038  normal  0.0231013 
 
 
-
 
NC_010505  Mrad2831_3642  BadM/Rrf2 family transcriptional regulator  54.14 
 
 
163 aa  139  1.9999999999999998e-32  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0315634 
 
 
-
 
NC_010508  Bcenmc03_1872  BadM/Rrf2 family transcriptional regulator  47.93 
 
 
171 aa  139  1.9999999999999998e-32  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.628801  hitchhiker  0.000127972 
 
 
-
 
NC_010524  Lcho_1476  BadM/Rrf2 family transcriptional regulator  46.48 
 
 
165 aa  139  1.9999999999999998e-32  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0550713 
 
 
-
 
NC_009080  BMA10247_1719  putative transcriptional regulator  48.85 
 
 
162 aa  138  3e-32  Burkholderia mallei NCTC 10247  Bacteria  normal  0.149273  n/a   
 
 
-
 
NC_008836  BMA10229_A2883  Rrf2 family protein  48.85 
 
 
162 aa  138  3e-32  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2710  putative transcriptional regulator  48.85 
 
 
162 aa  138  3.9999999999999997e-32  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0606  Rrf2 family protein  49.61 
 
 
165 aa  138  3.9999999999999997e-32  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2830  Rrf2 family protein  48.85 
 
 
162 aa  138  3.9999999999999997e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2768  putative transcriptional regulator  48.85 
 
 
162 aa  138  3.9999999999999997e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  0.356622  n/a   
 
 
-
 
NC_007510  Bcep18194_A5149  BadM/Rrf2 family transcriptional regulator  47.34 
 
 
171 aa  138  3.9999999999999997e-32  Burkholderia sp. 383  Bacteria  normal  0.911409  normal 
 
 
-
 
NC_008785  BMASAVP1_A2406  Rrf2 family protein  48.85 
 
 
162 aa  138  3.9999999999999997e-32  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_6231  BadM/Rrf2 family transcriptional regulator  47.34 
 
 
171 aa  137  4.999999999999999e-32  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1848  BadM/Rrf2 family transcriptional regulator  47.34 
 
 
171 aa  137  4.999999999999999e-32  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_1786  BadM/Rrf2 family transcriptional regulator  54.01 
 
 
172 aa  137  6e-32  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_0763  BadM/Rrf2 family transcriptional regulator  46.26 
 
 
175 aa  137  8.999999999999999e-32  Psychrobacter sp. PRwf-1  Bacteria  normal  0.897031  normal 
 
 
-
 
NC_010551  BamMC406_1758  BadM/Rrf2 family transcriptional regulator  53.28 
 
 
172 aa  136  2e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.106493 
 
 
-
 
NC_008340  Mlg_0226  BadM/Rrf2 family transcriptional regulator  49.29 
 
 
162 aa  135  2e-31  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_2967  hypothetical protein  47.06 
 
 
153 aa  135  3.0000000000000003e-31  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.00272013  n/a   
 
 
-
 
NC_010681  Bphyt_1812  transcriptional regulator, BadM/Rrf2 family  47.4 
 
 
166 aa  135  3.0000000000000003e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  0.502319  normal  0.154118 
 
 
-
 
NC_008740  Maqu_3071  BadM/Rrf2 family transcriptional regulator  51.97 
 
 
145 aa  134  4e-31  Marinobacter aquaeolei VT8  Bacteria  normal  0.0569291  n/a   
 
 
-
 
NC_007951  Bxe_A2375  BadM/Rrf2 family transcriptional regulator  46.1 
 
 
166 aa  134  8e-31  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.727332 
 
 
-
 
NC_010622  Bphy_0937  transcriptional regulator, TrmB  50.76 
 
 
175 aa  133  9.999999999999999e-31  Burkholderia phymatum STM815  Bacteria  normal  normal  0.901092 
 
 
-
 
NC_007964  Nham_3492  BadM/Rrf2 family transcriptional regulator  49.61 
 
 
150 aa  132  1.9999999999999998e-30  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1628  transcriptional regulator, BadM/Rrf2 family  46.21 
 
 
147 aa  132  1.9999999999999998e-30  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1690  BadM/Rrf2 family transcriptional regulator  52.76 
 
 
147 aa  132  1.9999999999999998e-30  Paracoccus denitrificans PD1222  Bacteria  normal  0.0968234  normal  0.880736 
 
 
-
 
NC_013411  GYMC61_2545  transcriptional regulator, BadM/Rrf2 family  44.59 
 
 
147 aa  131  3.9999999999999996e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008709  Ping_0631  transcriptional regulator, BadM/Rrf2 family protein  43.26 
 
 
147 aa  130  6.999999999999999e-30  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0101  BadM/Rrf2 family transcriptional regulator  48.09 
 
 
146 aa  130  9e-30  Saccharophagus degradans 2-40  Bacteria  normal  0.464439  normal 
 
 
-
 
NC_010581  Bind_1973  BadM/Rrf2 family transcriptional regulator  48.53 
 
 
150 aa  129  2.0000000000000002e-29  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0743  hypothetical protein  46.32 
 
 
150 aa  128  3e-29  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.798727  normal 
 
 
-
 
NC_010084  Bmul_1425  BadM/Rrf2 family transcriptional regulator  50.74 
 
 
161 aa  128  4.0000000000000003e-29  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0574582  hitchhiker  0.00433375 
 
 
-
 
NC_011365  Gdia_1513  transcriptional regulator, BadM/Rrf2 family  50.38 
 
 
146 aa  127  5.0000000000000004e-29  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.334315 
 
 
-
 
NC_006348  BMA1378  Rrf2 family protein  49.65 
 
 
165 aa  127  5.0000000000000004e-29  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1868  Rrf2 family protein  49.65 
 
 
165 aa  127  5.0000000000000004e-29  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2390  transcriptional regulator  49.65 
 
 
165 aa  127  5.0000000000000004e-29  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1140  putative transcriptional regulator  49.65 
 
 
165 aa  127  5.0000000000000004e-29  Burkholderia mallei NCTC 10247  Bacteria  normal  0.155582  n/a   
 
 
-
 
NC_009074  BURPS668_2225  Rrf2 family protein  49.65 
 
 
165 aa  127  5.0000000000000004e-29  Burkholderia pseudomallei 668  Bacteria  normal  0.543242  n/a   
 
 
-
 
NC_009076  BURPS1106A_2263  putative transcriptional regulator  49.65 
 
 
165 aa  127  5.0000000000000004e-29  Burkholderia pseudomallei 1106a  Bacteria  normal  0.845273  n/a   
 
 
-
 
NC_008836  BMA10229_A0028  Rrf2 family protein  49.65 
 
 
165 aa  127  5.0000000000000004e-29  Burkholderia mallei NCTC 10229  Bacteria  normal  0.62183  n/a   
 
 
-
 
NC_007651  BTH_I2204  Rrf2 family protein  48.92 
 
 
180 aa  127  6e-29  Burkholderia thailandensis E264  Bacteria  normal  0.0131831  n/a   
 
 
-
 
NC_011662  Tmz1t_0412  transcriptional regulator, BadM/Rrf2 family  44.72 
 
 
163 aa  126  1.0000000000000001e-28  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_1523  BadM/Rrf2 family transcriptional regulator  40.96 
 
 
181 aa  125  4.0000000000000003e-28  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_4221  BadM/Rrf2 family transcriptional regulator  47.37 
 
 
149 aa  125  4.0000000000000003e-28  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1866  BadM/Rrf2 family transcriptional regulator  45.04 
 
 
154 aa  124  5e-28  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp2600  hypothetical protein  41.73 
 
 
143 aa  123  1e-27  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007908  Rfer_1883  BadM/Rrf2 family transcriptional regulator  54.33 
 
 
169 aa  122  2e-27  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.00237919  n/a   
 
 
-
 
NC_007964  Nham_3286  BadM/Rrf2 family transcriptional regulator  45.04 
 
 
142 aa  121  3e-27  Nitrobacter hamburgensis X14  Bacteria  normal  0.914657  n/a   
 
 
-
 
NC_010511  M446_2865  BadM/Rrf2 family transcriptional regulator  50.94 
 
 
157 aa  121  4e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.253756  normal 
 
 
-
 
NC_008789  Hhal_2401  BadM/Rrf2 family transcriptional regulator  45.19 
 
 
152 aa  121  5e-27  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1447  Rrf2 family protein  48.53 
 
 
143 aa  121  6e-27  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.0973586  n/a   
 
 
-
 
NC_009831  Ssed_4474  BadM/Rrf2 family transcriptional regulator  46.15 
 
 
151 aa  120  9e-27  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000199058  hitchhiker  0.00000000296889 
 
 
-
 
NC_009636  Smed_0328  iron-responsive transcriptional regulator  43.31 
 
 
154 aa  120  9.999999999999999e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.069835 
 
 
-
 
NC_007948  Bpro_4724  BadM/Rrf2 family transcriptional regulator  46.62 
 
 
156 aa  120  9.999999999999999e-27  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_006369  lpl2456  hypothetical protein  40.16 
 
 
143 aa  119  1.9999999999999998e-26  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010338  Caul_0854  BadM/Rrf2 family transcriptional regulator  47.33 
 
 
151 aa  119  1.9999999999999998e-26  Caulobacter sp. K31  Bacteria  normal  normal  0.0962468 
 
 
-
 
NC_008242  Meso_4279  BadM/Rrf2 family transcriptional regulator  46.46 
 
 
153 aa  119  1.9999999999999998e-26  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0838  iron-responsive transcriptional regulator  46.62 
 
 
156 aa  118  3e-26  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0518  BadM/Rrf2 family transcriptional regulator  47.37 
 
 
146 aa  117  9e-26  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0438222 
 
 
-
 
NC_009484  Acry_1800  BadM/Rrf2 family transcriptional regulator  45.67 
 
 
150 aa  116  9.999999999999999e-26  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1064  transcriptional regulator, BadM/Rrf2 family  46.88 
 
 
143 aa  115  1.9999999999999998e-25  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2653  hypothetical protein  43.31 
 
 
142 aa  115  3e-25  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.87475  normal 
 
 
-
 
NC_008752  Aave_1572  BadM/Rrf2 family transcriptional regulator  45.96 
 
 
167 aa  115  3e-25  Acidovorax citrulli AAC00-1  Bacteria  normal  0.336073  normal 
 
 
-
 
NC_010506  Swoo_4881  BadM/Rrf2 family transcriptional regulator  45.38 
 
 
152 aa  115  3.9999999999999997e-25  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009717  Xaut_5030  BadM/Rrf2 family transcriptional regulator  44.88 
 
 
145 aa  114  5e-25  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2135  transcriptional regulator, BadM/Rrf2 family  51.77 
 
 
153 aa  114  6e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.329942  n/a   
 
 
-
 
NC_008789  Hhal_2223  BadM/Rrf2 family transcriptional regulator  45.93 
 
 
151 aa  114  8.999999999999998e-25  Halorhodospira halophila SL1  Bacteria  normal  0.339527  n/a   
 
 
-
 
NC_009783  VIBHAR_00086  transcriptional repressor NsrR  43.18 
 
 
141 aa  113  1.0000000000000001e-24  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_2243  transcriptional regulator, BadM/Rrf2 family  46.09 
 
 
140 aa  113  1.0000000000000001e-24  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3810  BadM/Rrf2 family transcriptional regulator  45.74 
 
 
150 aa  112  2.0000000000000002e-24  Shewanella loihica PV-4  Bacteria  normal  0.209804  normal  0.479131 
 
 
-
 
NC_002977  MCA2506  Rrf2 family protein  43.36 
 
 
150 aa  112  2.0000000000000002e-24  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0045  Rrf2 family protein  44.96 
 
 
151 aa  112  2.0000000000000002e-24  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009952  Dshi_1660  transcriptional regulator  42.42 
 
 
150 aa  112  2.0000000000000002e-24  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00278304 
 
 
-
 
NC_012850  Rleg_0421  iron-responsive transcriptional regulator  45.86 
 
 
160 aa  112  2.0000000000000002e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0531604  hitchhiker  0.00267682 
 
 
-
 
NC_011369  Rleg2_0389  iron-responsive transcriptional regulator  45.86 
 
 
160 aa  112  3e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00187363  normal  0.229909 
 
 
-
 
NC_008044  TM1040_2272  BadM/Rrf2 family transcriptional regulator  46.15 
 
 
154 aa  112  3e-24  Ruegeria sp. TM1040  Bacteria  normal  0.257031  normal  0.323507 
 
 
-
 
NC_009668  Oant_3617  iron-responsive transcriptional regulator  44.7 
 
 
153 aa  111  4.0000000000000004e-24  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.973931  n/a   
 
 
-
 
NC_013456  VEA_002267  nitrite-sensitive transcriptional repressor NsrR  43.94 
 
 
141 aa  110  6e-24  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3040  BadM/Rrf2 family transcriptional regulator  40.94 
 
 
149 aa  110  8.000000000000001e-24  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.323158 
 
 
-
 
NC_013422  Hneap_0930  transcriptional regulator, BadM/Rrf2 family  41.22 
 
 
150 aa  110  9e-24  Halothiobacillus neapolitanus c2  Bacteria  normal  0.276668  n/a   
 
 
-
 
NC_009511  Swit_1789  BadM/Rrf2 family transcriptional regulator  43.51 
 
 
147 aa  109  1.0000000000000001e-23  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_0766  transcriptional repressor NsrR  41.41 
 
 
141 aa  109  1.0000000000000001e-23  Dickeya zeae Ech1591  Bacteria  normal  0.61103  n/a   
 
 
-
 
NC_008577  Shewana3_0047  BadM/Rrf2 family transcriptional regulator  43.41 
 
 
151 aa  109  1.0000000000000001e-23  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000000883142 
 
 
-
 
NC_008687  Pden_4172  BadM/Rrf2 family transcriptional regulator  45.8 
 
 
182 aa  109  1.0000000000000001e-23  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2689  BadM/Rrf2 family transcriptional regulator  53.03 
 
 
145 aa  109  2.0000000000000002e-23  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0528  iron-responsive transcriptional regulator  44.7 
 
 
153 aa  109  2.0000000000000002e-23  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0041  BadM/Rrf2 family transcriptional regulator  43.41 
 
 
151 aa  108  2.0000000000000002e-23  Shewanella sp. MR-4  Bacteria  normal  0.0191012  hitchhiker  0.000277794 
 
 
-
 
NC_008322  Shewmr7_0039  BadM/Rrf2 family transcriptional regulator  43.41 
 
 
151 aa  109  2.0000000000000002e-23  Shewanella sp. MR-7  Bacteria  normal  0.370774  hitchhiker  0.00270297 
 
 
-
 
NC_009050  Rsph17029_4066  BadM/Rrf2 family transcriptional regulator  43.94 
 
 
145 aa  108  3e-23  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
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