130 homologs were found in PanDaTox collection
for query gene Pmen_2182 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_2182  filamentation induced by cAMP protein Fic  100 
 
 
513 aa  1048    Pseudomonas mendocina ymp  Bacteria  normal  0.108003  normal  0.0333314 
 
 
-
 
NC_010322  PputGB1_2191  filamentation induced by cAMP protein Fic  77.62 
 
 
508 aa  816    Pseudomonas putida GB-1  Bacteria  normal  0.154961  normal 
 
 
-
 
NC_010552  BamMC406_4531  filamentation induced by cAMP protein Fic  74.56 
 
 
514 aa  796    Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.139108 
 
 
-
 
NC_007952  Bxe_B0424  hypothetical protein  49.31 
 
 
512 aa  471  1e-132  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.00863334  normal 
 
 
-
 
NC_007948  Bpro_1561  filamentation induced by cAMP protein Fic  45.08 
 
 
536 aa  428  1e-118  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6074  filamentation induced by cAMP protein Fic  44.55 
 
 
544 aa  423  1e-117  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007968  Pcryo_2478  filamentation induced by cAMP protein Fic  41.76 
 
 
526 aa  402  9.999999999999999e-111  Psychrobacter cryohalolentis K5  Bacteria  normal  0.321663  normal  0.723541 
 
 
-
 
NC_007509  Bcep18194_C7027  putative filamentation induced by cAMP protein Fic  42.21 
 
 
537 aa  394  1e-108  Burkholderia sp. 383  Bacteria  normal  0.0133469  normal 
 
 
-
 
NC_007204  Psyc_0051  hypothetical protein  40.78 
 
 
519 aa  387  1e-106  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_1534  filamentation induced by cAMP protein Fic  34.97 
 
 
537 aa  265  1e-69  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.0431591 
 
 
-
 
NC_009483  Gura_0597  filamentation induced by cAMP protein Fic  33.66 
 
 
512 aa  266  1e-69  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0908  hypothetical protein  31.24 
 
 
503 aa  255  1.0000000000000001e-66  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.207571  n/a   
 
 
-
 
NC_013173  Dbac_1647  filamentation induced by cAMP protein Fic  32.24 
 
 
502 aa  255  1.0000000000000001e-66  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.887162  n/a   
 
 
-
 
NC_011059  Paes_1736  filamentation induced by cAMP protein Fic  32.58 
 
 
502 aa  254  2.0000000000000002e-66  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.00739697  normal  0.272754 
 
 
-
 
NC_007925  RPC_1039  filamentation induced by cAMP protein Fic  32.42 
 
 
516 aa  227  5.0000000000000005e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0910  filamentation induced by cAMP protein Fic  31.67 
 
 
564 aa  224  3e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.555407  normal 
 
 
-
 
NC_012854  Rleg_6486  filamentation induced by cAMP protein Fic  33.2 
 
 
514 aa  223  8e-57  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.761112 
 
 
-
 
NC_011662  Tmz1t_0353  filamentation induced by cAMP protein Fic  32.12 
 
 
495 aa  204  3e-51  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0890  filamentation induced by cAMP protein Fic  31.06 
 
 
555 aa  198  2.0000000000000003e-49  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.0367824  normal 
 
 
-
 
NC_011059  Paes_2096  filamentation induced by cAMP protein Fic  33.18 
 
 
479 aa  191  2e-47  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2022  filamentation induced by cAMP protein Fic  30.08 
 
 
505 aa  161  3e-38  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.486943 
 
 
-
 
NC_009654  Mmwyl1_0276  filamentation induced by cAMP protein Fic  25.51 
 
 
498 aa  156  9e-37  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2025  filamentation induced by cAMP protein Fic  26.05 
 
 
507 aa  153  8.999999999999999e-36  Pseudomonas putida W619  Bacteria  normal  0.509627  normal 
 
 
-
 
NC_012560  Avin_49750  filamentation induced by cAMP protein  27.04 
 
 
509 aa  152  2e-35  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2666  filamentation induced by cAMP protein Fic  25.51 
 
 
496 aa  142  9.999999999999999e-33  Dechloromonas aromatica RCB  Bacteria  normal  0.939916  normal 
 
 
-
 
NC_008781  Pnap_1899  filamentation induced by cAMP protein Fic  24.9 
 
 
511 aa  135  1.9999999999999998e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.669104  normal  0.246162 
 
 
-
 
NC_006369  lpl2288  hypothetical protein  41.98 
 
 
502 aa  62  0.00000003  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013757  Gobs_3761  filamentation induced by cAMP protein Fic  29.25 
 
 
430 aa  60.8  0.00000006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.651271  n/a   
 
 
-
 
NC_009455  DehaBAV1_0190  filamentation induced by cAMP protein Fic  25.37 
 
 
384 aa  58.5  0.0000003  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5004  filamentation induced by cAMP protein Fic  35.11 
 
 
381 aa  56.2  0.000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3069  filamentation induced by cAMP protein Fic  30.83 
 
 
309 aa  56.2  0.000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6451  filamentation induced by cAMP protein Fic  38.82 
 
 
378 aa  55.5  0.000002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0184045 
 
 
-
 
NC_012560  Avin_42040  hypothetical protein  29.55 
 
 
386 aa  55.1  0.000003  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0233  fic family protein  27.81 
 
 
377 aa  53.1  0.00001  Treponema denticola ATCC 35405  Bacteria  normal  0.638848  n/a   
 
 
-
 
NC_011830  Dhaf_4488  filamentation induced by cAMP protein Fic  28.99 
 
 
380 aa  53.1  0.00001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3067  filamentation induced by cAMP protein Fic  30.83 
 
 
374 aa  52.8  0.00002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0828  filamentation induced by cAMP protein Fic  33.96 
 
 
509 aa  51.6  0.00003  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0777  filamentation induced by cAMP protein Fic  39.74 
 
 
356 aa  51.2  0.00004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.4104  n/a   
 
 
-
 
NC_013530  Xcel_1798  filamentation induced by cAMP protein Fic  38.82 
 
 
427 aa  51.2  0.00005  Xylanimonas cellulosilytica DSM 15894  Bacteria  hitchhiker  0.000000635308  n/a   
 
 
-
 
NC_008345  Sfri_3843  filamentation induced by cAMP protein Fic  36.84 
 
 
368 aa  50.8  0.00006  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3490  Fic family protein  24.58 
 
 
376 aa  50.8  0.00006  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_05510  hypothetical protein  38.04 
 
 
394 aa  50.4  0.00007  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_07450  hypothetical protein  38.26 
 
 
373 aa  50.4  0.00007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000039973  normal  0.18978 
 
 
-
 
NC_009656  PSPA7_0677  hypothetical protein  38.26 
 
 
373 aa  50.4  0.00007  Pseudomonas aeruginosa PA7  Bacteria  decreased coverage  0.00227082  n/a   
 
 
-
 
NC_010159  YpAngola_A0823  Fic family protein  24.58 
 
 
389 aa  50.4  0.00007  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3792  hypothetical protein  28.7 
 
 
365 aa  50.4  0.00008  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4758  filamentation induced by cAMP protein Fic  30.48 
 
 
373 aa  50.1  0.0001  Polaromonas sp. JS666  Bacteria  normal  normal  0.179333 
 
 
-
 
NC_009727  CBUD_2174  Fic family protein  27.56 
 
 
348 aa  50.1  0.0001  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2207  hypothetical protein  27.56 
 
 
348 aa  50.1  0.0001  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.00000284697  n/a   
 
 
-
 
NC_010465  YPK_3619  filamentation induced by cAMP protein Fic  30.43 
 
 
376 aa  50.1  0.0001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4817  filamentation induced by cAMP protein Fic  37.39 
 
 
379 aa  50.1  0.0001  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_22590  hypothetical protein  26.45 
 
 
429 aa  50.1  0.0001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2109  filamentation induced by cAMP protein Fic  33.33 
 
 
391 aa  48.9  0.0002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0823  filamentation induced by cAMP protein Fic  31.11 
 
 
374 aa  49.3  0.0002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007796  Mhun_1731  filamentation induced by cAMP protein Fic  26.94 
 
 
380 aa  49.3  0.0002  Methanospirillum hungatei JF-1  Archaea  normal  0.142592  normal 
 
 
-
 
NC_011757  Mchl_1058  filamentation induced by cAMP protein Fic  38.24 
 
 
529 aa  48.9  0.0002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.620217 
 
 
-
 
NC_007974  Rmet_4648  hypothetical protein  31.43 
 
 
384 aa  48.9  0.0002  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00489554  normal 
 
 
-
 
NC_008347  Mmar10_2315  filamentation induced by cAMP protein Fic  28.81 
 
 
376 aa  48.9  0.0002  Maricaulis maris MCS10  Bacteria  normal  0.655269  normal 
 
 
-
 
NC_008726  Mvan_2529  filamentation induced by cAMP protein Fic  32.41 
 
 
402 aa  48.9  0.0002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009339  Mflv_5504  filamentation induced by cAMP protein Fic  35.24 
 
 
394 aa  49.3  0.0002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0732622  normal  0.099278 
 
 
-
 
NC_013512  Sdel_2002  filamentation induced by cAMP protein Fic  32.43 
 
 
375 aa  48.9  0.0002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.733317  n/a   
 
 
-
 
NC_007955  Mbur_1635  filamentation induced by cAMP protein Fic  27.4 
 
 
326 aa  48.5  0.0003  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_008391  Bamb_4935  filamentation induced by cAMP protein Fic  30.58 
 
 
373 aa  48.1  0.0003  Burkholderia ambifaria AMMD  Bacteria  normal  0.684685  normal  0.113714 
 
 
-
 
NC_008554  Sfum_2057  filamentation induced by cAMP protein Fic  27.14 
 
 
377 aa  48.5  0.0003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.280737  normal 
 
 
-
 
NC_009457  VC0395_A2669  Fic family protein  31.03 
 
 
330 aa  48.5  0.0003  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4924  filamentation induced by cAMP protein Fic  31.25 
 
 
369 aa  48.5  0.0003  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.0000928256 
 
 
-
 
NC_010681  Bphyt_0300  filamentation induced by cAMP protein Fic  36.56 
 
 
398 aa  48.5  0.0003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.372367  normal 
 
 
-
 
NC_008825  Mpe_A0010  hypothetical protein  36.96 
 
 
383 aa  47.8  0.0004  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3413  hypothetical protein  32.73 
 
 
371 aa  47.8  0.0005  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2094  filamentation induced by cAMP protein Fic  36.67 
 
 
251 aa  47.8  0.0005  Burkholderia sp. 383  Bacteria  normal  0.437335  normal 
 
 
-
 
NC_008345  Sfri_1955  filamentation induced by cAMP protein Fic  30.48 
 
 
333 aa  47.8  0.0005  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.484154  n/a   
 
 
-
 
NC_002939  GSU0168  Fic family protein  32.67 
 
 
388 aa  47.4  0.0006  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3472  filamentation induced by cAMP protein Fic  30.48 
 
 
333 aa  47.4  0.0006  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3312  hypothetical protein  28.04 
 
 
376 aa  47.4  0.0006  Bradyrhizobium sp. BTAi1  Bacteria  decreased coverage  0.00970462  normal 
 
 
-
 
NC_004347  SO_0367  hypothetical protein  33.64 
 
 
371 aa  47.4  0.0007  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013037  Dfer_5385  filamentation induced by cAMP protein Fic  31.67 
 
 
370 aa  47.4  0.0007  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_28800  hypothetical protein  28.57 
 
 
331 aa  47  0.0007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000000000287413  decreased coverage  0.000000000406133 
 
 
-
 
NC_007005  Psyr_4664  filamentation induced by cAMP protein Fic  35.59 
 
 
376 aa  47  0.0008  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.433809  normal 
 
 
-
 
NC_007969  Pcryo_1773  filamentation induced by cAMP protein Fic  32.32 
 
 
318 aa  47  0.0008  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.0104845 
 
 
-
 
NC_007947  Mfla_1182  filamentation induced by cAMP protein Fic  29.09 
 
 
374 aa  47  0.0009  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_2545  filamentation induced by cAMP protein Fic  39.47 
 
 
247 aa  47  0.0009  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.992105  normal 
 
 
-
 
NC_013739  Cwoe_2194  filamentation induced by cAMP protein Fic  32.29 
 
 
400 aa  46.6  0.001  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0315  filamentation induced by cAMP protein Fic  31.68 
 
 
398 aa  46.6  0.001  Polaromonas sp. JS666  Bacteria  normal  0.300424  normal 
 
 
-
 
NC_008048  Sala_2616  filamentation induced by cAMP protein Fic  32.08 
 
 
368 aa  46.6  0.001  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013744  Htur_3972  filamentation induced by cAMP protein Fic  36.84 
 
 
385 aa  46.2  0.001  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3625  filamentation induced by cAMP protein Fic  34.04 
 
 
371 aa  47  0.001  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1106  filamentation induced by cAMP protein Fic  36.08 
 
 
533 aa  46.2  0.001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_0970  filamentation induced by cAMP protein Fic  28.93 
 
 
247 aa  47  0.001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.952557  n/a   
 
 
-
 
NC_011071  Smal_3268  filamentation induced by cAMP protein Fic  34.78 
 
 
381 aa  46.2  0.001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.592904  normal 
 
 
-
 
NC_004578  PSPTO_0523  Fic family protein  34.82 
 
 
376 aa  45.8  0.002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0152  Fic family protein  32.61 
 
 
416 aa  46.2  0.002  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.19734 
 
 
-
 
NC_011663  Sbal223_0369  filamentation induced by cAMP protein Fic  35.06 
 
 
371 aa  45.8  0.002  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000333205 
 
 
-
 
NC_008577  Shewana3_3804  filamentation induced by cAMP protein Fic  35.06 
 
 
371 aa  45.4  0.002  Shewanella sp. ANA-3  Bacteria  normal  0.539894  normal 
 
 
-
 
NC_008609  Ppro_0217  filamentation induced by cAMP protein Fic  40.48 
 
 
508 aa  45.8  0.002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3980  filamentation induced by cAMP protein Fic  30.38 
 
 
408 aa  45.8  0.002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.231273 
 
 
-
 
NC_009052  Sbal_0361  filamentation induced by cAMP protein Fic  35.06 
 
 
371 aa  45.8  0.002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0276  filamentation induced by cAMP protein Fic  30.7 
 
 
387 aa  46.2  0.002  Roseiflexus sp. RS-1  Bacteria  normal  0.475066  unclonable  0.0000132219 
 
 
-
 
NC_013204  Elen_3019  filamentation induced by cAMP protein Fic  35.63 
 
 
403 aa  45.4  0.002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0366  filamentation induced by cAMP protein Fic  35.06 
 
 
375 aa  45.8  0.002  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0817  filamentation induced by cAMP protein Fic  30.67 
 
 
256 aa  45.1  0.003  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
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