More than 300 homologs were found in PanDaTox collection
for query gene Pmen_2174 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  66.36 
 
 
544 aa  679    Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_004578  PSPTO_3699  methyl-accepting chemotaxis protein  69.17 
 
 
543 aa  681    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  69.98 
 
 
543 aa  740    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  66.73 
 
 
544 aa  697    Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  67.1 
 
 
544 aa  681    Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  72.61 
 
 
569 aa  776    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  66.36 
 
 
544 aa  680    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  100 
 
 
544 aa  1093    Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  41.91 
 
 
545 aa  419  1e-116  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  43.93 
 
 
556 aa  410  1e-113  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  41.6 
 
 
548 aa  411  1e-113  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  39.37 
 
 
540 aa  376  1e-103  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  39.68 
 
 
564 aa  371  1e-101  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  38.08 
 
 
548 aa  372  1e-101  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  38.49 
 
 
549 aa  360  4e-98  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  36.78 
 
 
548 aa  357  1.9999999999999998e-97  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  37.25 
 
 
548 aa  352  1e-95  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
664 aa  351  2e-95  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_008345  Sfri_2212  methyl-accepting chemotaxis sensory transducer  38.53 
 
 
549 aa  347  2e-94  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  35.3 
 
 
554 aa  346  7e-94  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  36.05 
 
 
549 aa  338  9.999999999999999e-92  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.02 
 
 
546 aa  333  4e-90  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
546 aa  326  9e-88  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  37.04 
 
 
587 aa  325  1e-87  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  33.64 
 
 
566 aa  315  9.999999999999999e-85  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  37.23 
 
 
559 aa  313  4.999999999999999e-84  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0672  methyl-accepting chemotaxis sensory transducer  36.91 
 
 
568 aa  311  2e-83  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2728  chemotaxis sensory transducer  34.86 
 
 
544 aa  308  2.0000000000000002e-82  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00837045  normal  0.306222 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  34.21 
 
 
585 aa  305  2.0000000000000002e-81  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  31.82 
 
 
566 aa  304  3.0000000000000004e-81  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  33.94 
 
 
540 aa  304  3.0000000000000004e-81  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  38.08 
 
 
545 aa  303  7.000000000000001e-81  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.08 
 
 
545 aa  302  1e-80  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000194984 
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  37.87 
 
 
545 aa  301  1e-80  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_008321  Shewmr4_1767  methyl-accepting chemotaxis sensory transducer  35.24 
 
 
545 aa  301  1e-80  Shewanella sp. MR-4  Bacteria  normal  0.381763  normal 
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  37.87 
 
 
545 aa  301  1e-80  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.99 
 
 
566 aa  301  2e-80  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_008322  Shewmr7_1845  methyl-accepting chemotaxis sensory transducer  35.24 
 
 
545 aa  301  2e-80  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  32.22 
 
 
570 aa  300  3e-80  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_011891  A2cp1_3858  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.56 
 
 
526 aa  300  4e-80  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  34.45 
 
 
564 aa  298  2e-79  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_011145  AnaeK_3775  methyl-accepting chemotaxis sensory transducer  34.74 
 
 
526 aa  298  2e-79  Anaeromyxobacter sp. K  Bacteria  normal  0.268134  n/a   
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
519 aa  297  3e-79  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.8 
 
 
584 aa  296  9e-79  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_009438  Sputcn32_2116  methyl-accepting chemotaxis sensory transducer  35.79 
 
 
545 aa  295  2e-78  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  35.38 
 
 
584 aa  293  4e-78  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2240  methyl-accepting chemotaxis protein  33.27 
 
 
545 aa  293  6e-78  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  34.74 
 
 
554 aa  293  8e-78  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_011662  Tmz1t_1371  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.33 
 
 
544 aa  291  2e-77  Thauera sp. MZ1T  Bacteria  normal  0.116754  n/a   
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  33.78 
 
 
554 aa  291  2e-77  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3718  methyl-accepting chemotaxis sensory transducer  35.34 
 
 
526 aa  290  4e-77  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.734846  n/a   
 
 
-
 
NC_008577  Shewana3_2254  methyl-accepting chemotaxis sensory transducer  35.28 
 
 
545 aa  290  5.0000000000000004e-77  Shewanella sp. ANA-3  Bacteria  normal  normal  0.492 
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  34.82 
 
 
554 aa  290  5.0000000000000004e-77  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  34.69 
 
 
569 aa  290  7e-77  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  34.55 
 
 
554 aa  290  7e-77  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  37.18 
 
 
554 aa  288  2e-76  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  36.2 
 
 
560 aa  286  5e-76  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  33.98 
 
 
555 aa  286  5.999999999999999e-76  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  35.32 
 
 
541 aa  286  7e-76  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  34.58 
 
 
554 aa  284  2.0000000000000002e-75  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  44.89 
 
 
712 aa  284  2.0000000000000002e-75  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  33.45 
 
 
554 aa  284  4.0000000000000003e-75  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  34.17 
 
 
554 aa  283  6.000000000000001e-75  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  45.02 
 
 
712 aa  282  1e-74  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  33.89 
 
 
554 aa  281  2e-74  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  43.33 
 
 
637 aa  281  2e-74  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  32.97 
 
 
558 aa  281  3e-74  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  33.64 
 
 
538 aa  280  5e-74  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  37.41 
 
 
561 aa  280  6e-74  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_008321  Shewmr4_3323  methyl-accepting chemotaxis sensory transducer  34.04 
 
 
554 aa  280  6e-74  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.85 
 
 
533 aa  279  8e-74  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  34.3 
 
 
568 aa  279  8e-74  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  34.84 
 
 
557 aa  278  1e-73  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  37.18 
 
 
554 aa  279  1e-73  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  33.21 
 
 
554 aa  279  1e-73  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  33.21 
 
 
554 aa  278  2e-73  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  34.3 
 
 
554 aa  278  2e-73  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  33.08 
 
 
554 aa  278  2e-73  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.03 
 
 
554 aa  277  3e-73  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  32.65 
 
 
519 aa  278  3e-73  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  35.62 
 
 
533 aa  277  3e-73  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  34.31 
 
 
536 aa  277  4e-73  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  38.6 
 
 
560 aa  277  4e-73  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.29 
 
 
533 aa  276  7e-73  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  34.57 
 
 
563 aa  276  8e-73  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  34.48 
 
 
554 aa  276  1.0000000000000001e-72  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  44.73 
 
 
638 aa  275  1.0000000000000001e-72  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  34.81 
 
 
554 aa  275  2.0000000000000002e-72  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  33.46 
 
 
554 aa  275  2.0000000000000002e-72  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  34.19 
 
 
533 aa  275  2.0000000000000002e-72  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  34.07 
 
 
515 aa  274  3e-72  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.09 
 
 
554 aa  274  3e-72  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  36.97 
 
 
561 aa  273  6e-72  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  34.56 
 
 
533 aa  272  9e-72  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  33.83 
 
 
519 aa  271  2e-71  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  32.73 
 
 
585 aa  271  2.9999999999999997e-71  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  41.75 
 
 
713 aa  270  5.9999999999999995e-71  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_010505  Mrad2831_1766  methyl-accepting chemotaxis sensory transducer  36.21 
 
 
575 aa  268  1e-70  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  32.67 
 
 
567 aa  269  1e-70  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  33.83 
 
 
563 aa  268  2e-70  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
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