3 homologs were found in PanDaTox collection
for query gene Pmen_0025 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_0025  hypothetical protein  100 
 
 
74 aa  146  1.0000000000000001e-34  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1387  type III secretion protein HrpF  40.54 
 
 
74 aa  61.6  0.000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1198  type III secretion protein HrpF  29.73 
 
 
74 aa  40.4  0.008  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0936579 
 
 
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