More than 300 homologs were found in PanDaTox collection
for query gene Plav_0891 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  100 
 
 
268 aa  521  1e-147  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  61.72 
 
 
298 aa  303  2.0000000000000002e-81  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  57.93 
 
 
280 aa  281  8.000000000000001e-75  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
NC_007802  Jann_1473  binding-protein-dependent transport systems inner membrane component  58.59 
 
 
283 aa  280  2e-74  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1625  binding-protein-dependent transport systems inner membrane component  52.33 
 
 
285 aa  264  8.999999999999999e-70  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0792607  normal  0.95709 
 
 
-
 
NC_009952  Dshi_1382  binding-protein-dependent transport systems inner membrane component  56.92 
 
 
285 aa  261  1e-68  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.13305  normal 
 
 
-
 
NC_011004  Rpal_0469  binding-protein-dependent transport systems inner membrane component  57.98 
 
 
274 aa  258  1e-67  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.858995  n/a   
 
 
-
 
NC_011369  Rleg2_1676  binding-protein-dependent transport systems inner membrane component  51.55 
 
 
287 aa  251  9.000000000000001e-66  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00381914  normal 
 
 
-
 
NC_007964  Nham_0427  binding-protein-dependent transport systems inner membrane component  56.64 
 
 
279 aa  249  5e-65  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4665  binding-protein-dependent transport systems inner membrane component  51.94 
 
 
284 aa  248  6e-65  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.65192 
 
 
-
 
NC_012791  Vapar_5134  binding-protein-dependent transport systems inner membrane component  55.97 
 
 
294 aa  247  1e-64  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0333  binding-protein dependent transport system inner membrane protein  55.43 
 
 
278 aa  245  4.9999999999999997e-64  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3552  ABC transporter membrane spanning protein  51.1 
 
 
285 aa  245  6e-64  Agrobacterium vitis S4  Bacteria  normal  0.0625026  n/a   
 
 
-
 
NC_012791  Vapar_4760  binding-protein-dependent transport systems inner membrane component  49.03 
 
 
267 aa  243  3e-63  Variovorax paradoxus S110  Bacteria  normal  0.318809  n/a   
 
 
-
 
NC_007958  RPD_0258  binding-protein-dependent transport systems inner membrane component  56.15 
 
 
274 aa  241  7.999999999999999e-63  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.750925 
 
 
-
 
NC_009485  BBta_1263  ABC transporter permease  50.97 
 
 
262 aa  240  2e-62  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.165267 
 
 
-
 
NC_008825  Mpe_A3414  ATP-binding protein of ABC transporter  55.51 
 
 
280 aa  236  2e-61  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.24016 
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  54.07 
 
 
264 aa  235  7e-61  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  53.66 
 
 
264 aa  233  2.0000000000000002e-60  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7480  ABC transporter permease  58.2 
 
 
271 aa  230  2e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.477102  normal  0.131238 
 
 
-
 
NC_010725  Mpop_1095  binding-protein-dependent transport systems inner membrane component  54.04 
 
 
264 aa  226  3e-58  Methylobacterium populi BJ001  Bacteria  normal  0.0240883  normal  0.166534 
 
 
-
 
NC_007778  RPB_0572  binding-protein-dependent transport systems inner membrane component  58.09 
 
 
274 aa  223  2e-57  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0627389  normal  0.343483 
 
 
-
 
NC_002947  PP_3210  ABC transporter, permease protein  49.25 
 
 
267 aa  214  9.999999999999999e-55  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1164  binding-protein-dependent transport systems inner membrane component  55.74 
 
 
260 aa  213  1.9999999999999998e-54  Methylocella silvestris BL2  Bacteria  n/a    normal  0.233018 
 
 
-
 
NC_008786  Veis_3145  binding-protein-dependent transport systems inner membrane component  56.54 
 
 
298 aa  214  1.9999999999999998e-54  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.433007  normal  0.243208 
 
 
-
 
NC_007951  Bxe_A2015  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  49.8 
 
 
252 aa  212  4.9999999999999996e-54  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2588  binding-protein-dependent transport systems inner membrane component  50.4 
 
 
267 aa  212  7e-54  Pseudomonas putida W619  Bacteria  normal  normal  0.417353 
 
 
-
 
NC_007925  RPC_0572  binding-protein-dependent transport systems inner membrane component  54.17 
 
 
276 aa  211  1e-53  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_0832  binding-protein-dependent transport systems inner membrane component  55.1 
 
 
254 aa  190  2e-47  Acidiphilium cryptum JF-5  Bacteria  normal  0.404323  n/a   
 
 
-
 
NC_010581  Bind_1091  binding-protein-dependent transport systems inner membrane component  51.23 
 
 
262 aa  187  1e-46  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1260  binding-protein-dependent transport systems inner membrane component  47.81 
 
 
252 aa  169  4e-41  Caulobacter sp. K31  Bacteria  normal  0.21476  normal  0.0147088 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  39.43 
 
 
283 aa  167  2e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_014148  Plim_2867  binding-protein-dependent transport systems inner membrane component  35.63 
 
 
277 aa  155  1e-36  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  35.32 
 
 
257 aa  152  5.9999999999999996e-36  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  35.78 
 
 
254 aa  148  8e-35  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  37.3 
 
 
273 aa  142  4e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  36.92 
 
 
257 aa  142  4e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
281 aa  142  5e-33  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
254 aa  142  5e-33  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  38.13 
 
 
277 aa  142  6e-33  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
268 aa  142  7e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
281 aa  142  8e-33  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  38.12 
 
 
261 aa  141  9.999999999999999e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  38.52 
 
 
259 aa  140  1.9999999999999998e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
268 aa  140  1.9999999999999998e-32  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  36.05 
 
 
288 aa  139  3e-32  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  36.02 
 
 
286 aa  139  6e-32  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_012669  Bcav_3788  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
317 aa  138  7e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0255815  normal 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
274 aa  138  7e-32  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_009050  Rsph17029_3904  binding-protein-dependent transport systems inner membrane component  35.8 
 
 
281 aa  139  7e-32  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  36.44 
 
 
278 aa  138  8.999999999999999e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  34.65 
 
 
286 aa  138  1e-31  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  34.25 
 
 
303 aa  138  1e-31  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_007494  RSP_3166  ABC transporter, inner membrane subunit  35.41 
 
 
281 aa  137  2e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0111  ABC transporter related  38.01 
 
 
493 aa  137  2e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  33.73 
 
 
284 aa  136  3.0000000000000003e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_17280  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  36.61 
 
 
325 aa  135  5e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.158115  normal  0.544115 
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  38.52 
 
 
258 aa  135  5e-31  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  34.66 
 
 
289 aa  135  5e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  37.3 
 
 
273 aa  135  7.000000000000001e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2281  binding-protein-dependent transport systems inner membrane component  34.11 
 
 
281 aa  135  7.000000000000001e-31  Frankia sp. EAN1pec  Bacteria  normal  0.695693  normal  0.331928 
 
 
-
 
NC_011369  Rleg2_3042  binding-protein-dependent transport systems inner membrane component  32.41 
 
 
375 aa  135  8e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
270 aa  134  9.999999999999999e-31  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  31.71 
 
 
256 aa  134  1.9999999999999998e-30  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_2545  binding-protein-dependent transport system protein  31.73 
 
 
287 aa  132  5e-30  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.240068  normal  0.521676 
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  35.5 
 
 
282 aa  132  6e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  32.68 
 
 
266 aa  132  6.999999999999999e-30  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  33.61 
 
 
266 aa  131  1.0000000000000001e-29  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
253 aa  130  2.0000000000000002e-29  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  34 
 
 
246 aa  130  3e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012850  Rleg_3297  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
375 aa  129  5.0000000000000004e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.149558 
 
 
-
 
NC_013441  Gbro_0259  binding-protein-dependent transport systems inner membrane component  38.12 
 
 
453 aa  129  6e-29  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  36.76 
 
 
250 aa  128  8.000000000000001e-29  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  35.09 
 
 
281 aa  127  1.0000000000000001e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
253 aa  127  2.0000000000000002e-28  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
263 aa  127  2.0000000000000002e-28  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  34.58 
 
 
271 aa  127  2.0000000000000002e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_3142  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
264 aa  126  3e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.32312  normal  0.0411868 
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  36.32 
 
 
308 aa  126  4.0000000000000003e-28  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3455  binding-protein dependent transport system inner membrane protein  35.66 
 
 
322 aa  126  5e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.833863  n/a   
 
 
-
 
NC_013093  Amir_2627  binding-protein-dependent transport systems inner membrane component  34.94 
 
 
288 aa  125  7e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752734  n/a   
 
 
-
 
NC_007802  Jann_2700  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
316 aa  123  2e-27  Jannaschia sp. CCS1  Bacteria  normal  0.505407  normal  0.565906 
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
255 aa  124  2e-27  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_009485  BBta_6031  putative ABC transporter, permease protein  33.72 
 
 
325 aa  124  2e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
253 aa  123  3e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_013440  Hoch_2033  binding-protein-dependent transport systems inner membrane component  40.86 
 
 
275 aa  123  3e-27  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0253714  normal  0.258175 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  35 
 
 
251 aa  122  4e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1095  binding-protein-dependent transport systems inner membrane component  30.13 
 
 
255 aa  122  5e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
260 aa  122  5e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  35 
 
 
251 aa  122  7e-27  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  28.69 
 
 
260 aa  122  7e-27  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  34.17 
 
 
250 aa  122  8e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  37.86 
 
 
258 aa  122  8e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  34.17 
 
 
250 aa  122  9e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  34.58 
 
 
250 aa  121  9.999999999999999e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  34.17 
 
 
250 aa  121  9.999999999999999e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  34.17 
 
 
250 aa  121  9.999999999999999e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  34.17 
 
 
250 aa  121  9.999999999999999e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_009767  Rcas_2389  binding-protein-dependent transport systems inner membrane component  38.97 
 
 
275 aa  121  9.999999999999999e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4527  binding-protein-dependent transport systems inner membrane component  39.57 
 
 
253 aa  121  9.999999999999999e-27  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>