19 homologs were found in PanDaTox collection
for query gene Ping_1879 on replicon NC_008709
Organism: Psychromonas ingrahamii 37



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008709  Ping_1879  hypothetical protein  100 
 
 
160 aa  316  9e-86  Psychromonas ingrahamii 37  Bacteria  normal  0.0165803  normal  0.0358717 
 
 
-
 
NC_009654  Mmwyl1_1846  hypothetical protein  44.08 
 
 
153 aa  143  9e-34  Marinomonas sp. MWYL1  Bacteria  normal  0.204323  normal  0.0132683 
 
 
-
 
NC_008228  Patl_0197  hypothetical protein  44.8 
 
 
151 aa  124  5e-28  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3534  hypothetical protein  34.03 
 
 
159 aa  79  0.00000000000002  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4836  hypothetical protein  28.35 
 
 
152 aa  67.4  0.00000000009  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3122  protein of unknown function DUF107  32.26 
 
 
152 aa  51.2  0.000006  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3128  hypothetical protein  32.26 
 
 
152 aa  51.2  0.000006  Escherichia coli ATCC 8739  Bacteria  normal  hitchhiker  0.0000772435 
 
 
-
 
NC_009801  EcE24377A_0527  nodulation efficiency family protein  32.26 
 
 
152 aa  51.2  0.000006  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0567  nodulation efficiency family protein  32.26 
 
 
152 aa  51.2  0.000006  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_00439  conserved inner membrane protein  32.26 
 
 
151 aa  50.8  0.000008  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0423  nodulation efficiency family protein  31.45 
 
 
152 aa  50.8  0.000008  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00444  hypothetical protein  32.26 
 
 
151 aa  50.8  0.000008  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0537  nodulation efficiency family protein  32.74 
 
 
152 aa  50.4  0.000009  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_0592  nodulation efficiency family protein  31.86 
 
 
152 aa  50.1  0.00001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.685146 
 
 
-
 
NC_009783  VIBHAR_01316  hypothetical protein  28.67 
 
 
153 aa  49.3  0.00002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_004151  putative activity regulator of membrane protease YbbK  26.06 
 
 
153 aa  48.1  0.00005  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_3005  protein of unknown function DUF107  26.57 
 
 
144 aa  43.1  0.001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_1803  nodulation efficiency protein NfeD  23.6 
 
 
437 aa  42  0.003  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3025  protein of unknown function DUF107  27.12 
 
 
151 aa  41.2  0.006  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
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