7 homologs were found in PanDaTox collection
for query gene Phep_3361 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013061  Phep_3361  hypothetical protein  100 
 
 
355 aa  733    Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.148862 
 
 
-
 
NC_013061  Phep_3365  hypothetical protein  48.6 
 
 
348 aa  326  3e-88  Pedobacter heparinus DSM 2366  Bacteria  normal  0.792231  normal  0.845884 
 
 
-
 
NC_009376  Pars_1633  hypothetical protein  20.36 
 
 
609 aa  63.5  0.000000005  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_013131  Caci_3583  lipopolysaccharide biosynthesis protein-like protein  22.07 
 
 
357 aa  55.5  0.000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.445439  normal 
 
 
-
 
NC_007406  Nwi_0538  lipopolysaccharide biosynthesis protein  24.4 
 
 
734 aa  50.8  0.00003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.644164 
 
 
-
 
NC_007964  Nham_1054  lipopolysaccharide biosynthesis protein  24.64 
 
 
734 aa  47.8  0.0003  Nitrobacter hamburgensis X14  Bacteria  normal  0.393158  n/a   
 
 
-
 
NC_009483  Gura_2346  lipopolysaccharide biosynthesis protein-like protein  27.5 
 
 
368 aa  43.1  0.007  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
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