More than 300 homologs were found in PanDaTox collection
for query gene Phep_3027 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013061  Phep_3027  short-chain dehydrogenase/reductase SDR  100 
 
 
272 aa  557  1e-158  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00333155 
 
 
-
 
NC_013132  Cpin_4665  short-chain dehydrogenase/reductase SDR  55.56 
 
 
266 aa  307  1.0000000000000001e-82  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.871012  hitchhiker  0.000000000383418 
 
 
-
 
NC_013730  Slin_1686  short-chain dehydrogenase/reductase SDR  53.73 
 
 
269 aa  296  2e-79  Spirosoma linguale DSM 74  Bacteria  normal  0.292744  normal 
 
 
-
 
NC_007413  Ava_3968  short chain dehydrogenase  43.41 
 
 
269 aa  213  2.9999999999999995e-54  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0231224  normal  0.018096 
 
 
-
 
NC_011884  Cyan7425_1902  short chain dehydrogenase  45.1 
 
 
269 aa  207  2e-52  Cyanothece sp. PCC 7425  Bacteria  normal  0.0327948  normal 
 
 
-
 
NC_008700  Sama_0389  short chain dehydrogenase  41.38 
 
 
270 aa  206  4e-52  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3168  short chain dehydrogenase  39.47 
 
 
270 aa  196  2.0000000000000003e-49  Polaromonas sp. JS666  Bacteria  normal  0.273274  normal  0.685188 
 
 
-
 
NC_011693  PHATRDRAFT_16295  predicted protein  43.53 
 
 
237 aa  195  7e-49  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0303319  n/a   
 
 
-
 
NC_009092  Shew_3415  short chain dehydrogenase  39 
 
 
268 aa  195  7e-49  Shewanella loihica PV-4  Bacteria  normal  0.560569  normal 
 
 
-
 
NC_009052  Sbal_0416  short chain dehydrogenase  39.77 
 
 
267 aa  194  1e-48  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3844  short chain dehydrogenase  39.77 
 
 
267 aa  194  1e-48  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000447473 
 
 
-
 
NC_009997  Sbal195_4040  short chain dehydrogenase  39.77 
 
 
267 aa  194  1e-48  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3918  short chain dehydrogenase  39.38 
 
 
267 aa  193  3e-48  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3404  short chain dehydrogenase  39.77 
 
 
267 aa  193  3e-48  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0441  short chain dehydrogenase  39.38 
 
 
267 aa  191  1e-47  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3588  short chain dehydrogenase  39 
 
 
267 aa  189  2.9999999999999997e-47  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0437  short chain dehydrogenase  39 
 
 
267 aa  189  2.9999999999999997e-47  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0438  short chain dehydrogenase  39.77 
 
 
267 aa  188  7e-47  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_0429  short chain dehydrogenase  39.77 
 
 
267 aa  187  1e-46  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1414  short chain dehydrogenase  39.16 
 
 
270 aa  187  1e-46  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0293  short chain dehydrogenase  38.61 
 
 
267 aa  186  4e-46  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_2951  short chain dehydrogenase  37.36 
 
 
276 aa  181  1e-44  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3735  short chain dehydrogenase  35.63 
 
 
281 aa  177  2e-43  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_12680  short chain dehydrogenase  35.47 
 
 
278 aa  171  1e-41  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1684  short-chain dehydrogenase/reductase SDR  34.77 
 
 
263 aa  153  2.9999999999999998e-36  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  34.75 
 
 
266 aa  152  4e-36  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  35.06 
 
 
264 aa  152  5e-36  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_013132  Cpin_6402  short-chain dehydrogenase/reductase SDR  31.09 
 
 
277 aa  149  4e-35  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000182624  normal 
 
 
-
 
NC_009523  RoseRS_1352  short-chain dehydrogenase/reductase SDR  36.78 
 
 
272 aa  148  7e-35  Roseiflexus sp. RS-1  Bacteria  normal  0.15703  normal 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  38.52 
 
 
261 aa  146  5e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013730  Slin_0208  short-chain dehydrogenase/reductase SDR  32.56 
 
 
263 aa  143  3e-33  Spirosoma linguale DSM 74  Bacteria  normal  0.196422  normal 
 
 
-
 
NC_013061  Phep_0379  short-chain dehydrogenase/reductase SDR  31.33 
 
 
262 aa  141  9.999999999999999e-33  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_2430  short-chain dehydrogenase/reductase SDR  33.33 
 
 
274 aa  138  7.999999999999999e-32  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  35.23 
 
 
257 aa  137  2e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_008148  Rxyl_0016  short-chain dehydrogenase/reductase SDR  33.98 
 
 
260 aa  134  9.999999999999999e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0185  short chain dehydrogenase  33.08 
 
 
256 aa  132  6e-30  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3693  short-chain dehydrogenase/reductase SDR  33.21 
 
 
309 aa  130  2.0000000000000002e-29  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4675  short-chain dehydrogenase/reductase SDR  33.21 
 
 
309 aa  130  2.0000000000000002e-29  Burkholderia cenocepacia HI2424  Bacteria  normal  0.396312  normal  0.215379 
 
 
-
 
NC_010515  Bcenmc03_5625  short-chain dehydrogenase/reductase SDR  33.21 
 
 
309 aa  130  2.0000000000000002e-29  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.285502  normal 
 
 
-
 
NC_009767  Rcas_3908  short-chain dehydrogenase/reductase SDR  34.11 
 
 
272 aa  129  4.0000000000000003e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.106718  normal  0.186536 
 
 
-
 
NC_007511  Bcep18194_B1144  Short-chain dehydrogenase/reductase SDR  33.21 
 
 
307 aa  129  4.0000000000000003e-29  Burkholderia sp. 383  Bacteria  normal  0.151567  normal  0.117156 
 
 
-
 
NC_011679  PHATR_36881  2-deoxy-D-gluconate 3-dehydrogenase  31.52 
 
 
308 aa  129  4.0000000000000003e-29  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.804236  n/a   
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  33.08 
 
 
278 aa  129  6e-29  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_011884  Cyan7425_0761  short-chain dehydrogenase/reductase SDR  32.58 
 
 
277 aa  129  6e-29  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.416641 
 
 
-
 
NC_008391  Bamb_4069  short-chain dehydrogenase/reductase SDR  32.13 
 
 
312 aa  129  7.000000000000001e-29  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.596903 
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  32.47 
 
 
295 aa  129  8.000000000000001e-29  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_006369  lpl0338  hypothetical protein  36.7 
 
 
257 aa  128  9.000000000000001e-29  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010086  Bmul_4018  short-chain dehydrogenase/reductase SDR  32.13 
 
 
312 aa  127  2.0000000000000002e-28  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.169146  normal  0.55969 
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  31.25 
 
 
308 aa  127  2.0000000000000002e-28  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  31.25 
 
 
308 aa  127  2.0000000000000002e-28  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  31.25 
 
 
308 aa  127  2.0000000000000002e-28  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  31.25 
 
 
308 aa  127  2.0000000000000002e-28  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  33.71 
 
 
275 aa  127  2.0000000000000002e-28  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  31.25 
 
 
308 aa  127  2.0000000000000002e-28  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1014  short-chain dehydrogenase/reductase SDR  35.27 
 
 
336 aa  126  3e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.264982  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  33.33 
 
 
281 aa  126  3e-28  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  31.77 
 
 
311 aa  126  3e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_006368  lpp0362  hypothetical protein  36.7 
 
 
257 aa  126  4.0000000000000003e-28  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  39.89 
 
 
258 aa  125  5e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1418  short-chain dehydrogenase/reductase SDR  34.43 
 
 
334 aa  126  5e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00000382267 
 
 
-
 
NC_011757  Mchl_0762  short-chain dehydrogenase/reductase SDR  35.27 
 
 
336 aa  125  5e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0904  Short-chain dehydrogenase/reductase SDR  35.75 
 
 
254 aa  125  6e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  37.43 
 
 
236 aa  125  6e-28  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_007413  Ava_0943  Short-chain dehydrogenase/reductase SDR  32.35 
 
 
293 aa  125  6e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_0093  short-chain dehydrogenase/reductase SDR  31.27 
 
 
266 aa  125  6e-28  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  30.88 
 
 
315 aa  125  6e-28  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  31.85 
 
 
279 aa  124  1e-27  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  32.28 
 
 
273 aa  124  1e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0158  short-chain dehydrogenase/reductase SDR  31.2 
 
 
271 aa  124  1e-27  Marinobacter aquaeolei VT8  Bacteria  normal  0.722445  n/a   
 
 
-
 
NC_010725  Mpop_1326  short-chain dehydrogenase/reductase SDR  34.78 
 
 
336 aa  124  2e-27  Methylobacterium populi BJ001  Bacteria  normal  0.945072  normal  0.131603 
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  33.46 
 
 
267 aa  124  2e-27  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_010184  BcerKBAB4_1826  3-ketoacyl-(acyl-carrier-protein) reductase  34.32 
 
 
239 aa  123  4e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7667  short-chain dehydrogenase/reductase SDR  31.15 
 
 
332 aa  122  7e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.755346  n/a   
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  30.68 
 
 
279 aa  122  7e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_010172  Mext_1326  short-chain dehydrogenase/reductase SDR  36.79 
 
 
254 aa  122  7e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.393683 
 
 
-
 
NC_012560  Avin_20190  Short-chain dehydrogenase/reductase SDR  31.42 
 
 
336 aa  122  8e-27  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2044  3-ketoacyl-(acyl-carrier-protein) reductase  33.9 
 
 
242 aa  122  9e-27  Bacillus cereus ATCC 10987  Bacteria  normal  0.252391  n/a   
 
 
-
 
NC_005945  BAS1819  3-ketoacyl-(acyl-carrier-protein) reductase  33.9 
 
 
242 aa  122  9e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1793  3-ketoacyl-(acyl-carrier-protein) reductase  33.9 
 
 
242 aa  122  9e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.512815  n/a   
 
 
-
 
NC_006274  BCZK1775  3-ketoacyl-(acyl-carrier-protein) reductase  33.9 
 
 
242 aa  122  9e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1704  short-chain dehydrogenase/reductase SDR  36.41 
 
 
327 aa  122  9e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.151565  normal 
 
 
-
 
NC_007530  GBAA_1958  3-ketoacyl-(acyl-carrier-protein) reductase  33.9 
 
 
242 aa  122  9e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1964  3-ketoacyl-(acyl-carrier-protein) reductase  33.9 
 
 
239 aa  121  9e-27  Bacillus cereus B4264  Bacteria  normal  0.130885  n/a   
 
 
-
 
NC_011658  BCAH187_A2065  3-ketoacyl-(acyl-carrier-protein) reductase  33.9 
 
 
239 aa  121  9e-27  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000861938  n/a   
 
 
-
 
NC_011772  BCG9842_B3364  3-ketoacyl-(acyl-carrier-protein) reductase  33.9 
 
 
239 aa  121  9e-27  Bacillus cereus G9842  Bacteria  normal  0.115947  hitchhiker  0.00000000000000894376 
 
 
-
 
NC_011773  BCAH820_1995  3-ketoacyl-(acyl-carrier-protein) reductase  33.9 
 
 
239 aa  121  9e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  5.591310000000001e-44 
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  32.12 
 
 
296 aa  121  9.999999999999999e-27  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1526  short-chain dehydrogenase/reductase SDR  35.94 
 
 
254 aa  121  9.999999999999999e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  35.98 
 
 
264 aa  121  9.999999999999999e-27  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  30.94 
 
 
264 aa  120  1.9999999999999998e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  36.51 
 
 
264 aa  120  1.9999999999999998e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0501  short-chain dehydrogenase/reductase SDR  30.45 
 
 
264 aa  120  1.9999999999999998e-26  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.132419  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  30.94 
 
 
264 aa  120  1.9999999999999998e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1494  3-ketoacyl-(acyl-carrier-protein) reductase  33.9 
 
 
239 aa  121  1.9999999999999998e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.000128809  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  30.94 
 
 
264 aa  120  1.9999999999999998e-26  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  32.12 
 
 
296 aa  120  1.9999999999999998e-26  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  35.98 
 
 
264 aa  120  1.9999999999999998e-26  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  36.51 
 
 
264 aa  120  1.9999999999999998e-26  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  30.94 
 
 
264 aa  120  3e-26  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1019  short-chain dehydrogenase/reductase SDR  33.91 
 
 
330 aa  119  3.9999999999999996e-26  Methylobacterium extorquens PA1  Bacteria  normal  0.0961773  normal 
 
 
-
 
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