13 homologs were found in PanDaTox collection
for query gene Phep_2691 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013061  Phep_2691  RNA polymerase sigma factor, sigma-70 family  100 
 
 		 187 aa  385  1e-106  Pedobacter heparinus DSM 2366  Bacteria  normal  1  decreased coverage  0.00174233 
 
 
-
 
NC_013132  Cpin_1935  RNA polymerase, sigma-24 subunit, ECF subfamily  29.94 
 
 		 191 aa  94  1e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_1208  RNA polymerase, sigma-24 subunit, ECF subfamily  34.76 
 
 		 195 aa  92.4  3e-18  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_2931  RNA polymerase sigma factor, sigma-70 family  27.71 
 
 		 188 aa  87.4  1e-16  Pedobacter heparinus DSM 2366  Bacteria  normal  0.578352  normal  0.0375651 
 
 
-
 
NC_008255  CHU_0780  DNA-directed RNA polymerase specialized sigma subunit  30.18 
 
 		 192 aa  87  2e-16  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.160939 
 
 
-
 
NC_008255  CHU_2053  RNA polymerase ECF-type sigma factor  28.4 
 
 		 190 aa  80.5  0.00000000000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_0953  RNA polymerase, sigma-E factor; heat shock and oxidative stress  29.14 
 
 		 179 aa  74.3  0.0000000000009  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0370429  normal  1 
 
 
-
 
NC_013730  Slin_3255  RNA polymerase, sigma-24 subunit, ECF subfamily  27.71 
 
 		 183 aa  72.8  0.000000000002  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_1160  DNA-directed RNA polymerase specialized sigma subunit  28.57 
 
 		 191 aa  71.6  0.000000000005  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.647303 
 
 
-
 
NC_008255  CHU_0824  RNA polymerase specialized sigma subunit  26.67 
 
 		 192 aa  64.3  0.000000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_2046  RNA polymerase specialized sigma subunit  26.42 
 
 		 190 aa  62  0.000000005  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.53065  normal  1 
 
 
-
 
NC_009441  Fjoh_1275  ECF subfamily RNA polymerase sigma-24 factor  26.14 
 
 		 194 aa  52  0.000005  Flavobacterium johnsoniae UW101  Bacteria  normal  0.457137  n/a   
 
 
-
 
NC_013132  Cpin_1890  transcriptional regulator, LuxR family  26.72 
 
 		 199 aa  42  0.005  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
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