More than 300 homologs were found in PanDaTox collection
for query gene Pfl01_4658 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  100 
 
 
529 aa  1063    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  52.63 
 
 
531 aa  476  1e-133  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.13 
 
 
523 aa  414  1e-114  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.58 
 
 
521 aa  400  9.999999999999999e-111  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  43.02 
 
 
521 aa  395  1e-109  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.21 
 
 
521 aa  397  1e-109  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  43.02 
 
 
521 aa  396  1e-109  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.47 
 
 
526 aa  394  1e-108  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  44.59 
 
 
521 aa  395  1e-108  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  44.02 
 
 
521 aa  395  1e-108  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3406  PAS  44.02 
 
 
521 aa  389  1e-107  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  43.64 
 
 
521 aa  390  1e-107  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  43.29 
 
 
524 aa  385  1e-106  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  41.21 
 
 
518 aa  388  1e-106  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  43.29 
 
 
524 aa  386  1e-106  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.02 
 
 
521 aa  387  1e-106  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  43.09 
 
 
524 aa  384  1e-105  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  42.31 
 
 
521 aa  385  1e-105  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.09 
 
 
524 aa  384  1e-105  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.16 
 
 
524 aa  379  1e-104  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  40.54 
 
 
522 aa  377  1e-103  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  43.26 
 
 
521 aa  378  1e-103  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.59 
 
 
524 aa  376  1e-103  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3294  methyl-accepting chemotaxis sensory transducer  43.74 
 
 
524 aa  375  1e-102  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.09 
 
 
524 aa  374  1e-102  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.09 
 
 
524 aa  373  1e-102  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  41.17 
 
 
524 aa  370  1e-101  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  44.42 
 
 
532 aa  366  1e-100  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  42.8 
 
 
521 aa  362  1e-98  Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  40.45 
 
 
532 aa  361  2e-98  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  38.05 
 
 
524 aa  360  4e-98  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.54 
 
 
521 aa  347  2e-94  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  37.04 
 
 
515 aa  347  3e-94  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  38.22 
 
 
516 aa  343  5.999999999999999e-93  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.99 
 
 
521 aa  342  8e-93  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  39.55 
 
 
532 aa  340  5e-92  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  40 
 
 
521 aa  339  5.9999999999999996e-92  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3735  PAS  40.64 
 
 
521 aa  339  5.9999999999999996e-92  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
534 aa  339  7e-92  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  41.43 
 
 
521 aa  338  9.999999999999999e-92  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  39.96 
 
 
521 aa  335  1e-90  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.04 
 
 
521 aa  334  3e-90  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.34 
 
 
516 aa  333  4e-90  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  39.2 
 
 
521 aa  332  8e-90  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_009092  Shew_2159  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.02 
 
 
523 aa  331  2e-89  Shewanella loihica PV-4  Bacteria  normal  0.416992  normal  0.881373 
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  40.5 
 
 
518 aa  331  2e-89  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  38.3 
 
 
524 aa  324  2e-87  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  38.91 
 
 
522 aa  323  4e-87  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  38.09 
 
 
522 aa  323  5e-87  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.89 
 
 
522 aa  321  1.9999999999999998e-86  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  38.09 
 
 
522 aa  320  3e-86  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  38.09 
 
 
522 aa  320  3.9999999999999996e-86  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
538 aa  320  3.9999999999999996e-86  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.35 
 
 
522 aa  314  2.9999999999999996e-84  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.35 
 
 
522 aa  313  3.9999999999999997e-84  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  36.38 
 
 
523 aa  313  4.999999999999999e-84  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.35 
 
 
522 aa  313  4.999999999999999e-84  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0337  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.1 
 
 
517 aa  308  2.0000000000000002e-82  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.62 
 
 
524 aa  307  3e-82  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.19 
 
 
527 aa  304  3.0000000000000004e-81  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  41.3 
 
 
419 aa  303  4.0000000000000003e-81  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  33.89 
 
 
511 aa  292  8e-78  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  37.58 
 
 
522 aa  288  2e-76  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.96 
 
 
522 aa  283  4.0000000000000003e-75  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.91 
 
 
522 aa  282  8.000000000000001e-75  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.46 
 
 
598 aa  281  2e-74  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.55 
 
 
522 aa  280  4e-74  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  35.36 
 
 
527 aa  280  6e-74  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  36.8 
 
 
520 aa  279  7e-74  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_1363  PAS  35.11 
 
 
544 aa  278  2e-73  Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.000284571 
 
 
-
 
NC_003910  CPS_1621  methyl-accepting chemotaxis protein  34.77 
 
 
513 aa  277  3e-73  Colwellia psychrerythraea 34H  Bacteria  normal  0.113175  n/a   
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  35.83 
 
 
522 aa  277  4e-73  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.63 
 
 
522 aa  276  5e-73  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  35.07 
 
 
520 aa  276  7e-73  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  35.43 
 
 
533 aa  275  1.0000000000000001e-72  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  35.63 
 
 
522 aa  274  3e-72  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  36.95 
 
 
517 aa  271  2e-71  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2405  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  36.72 
 
 
514 aa  268  1e-70  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000957151  normal  0.313744 
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.27 
 
 
514 aa  265  2e-69  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  35.56 
 
 
583 aa  262  8.999999999999999e-69  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0268  methyl-accepting chemotaxis sensory transducer  35.55 
 
 
514 aa  261  2e-68  Burkholderia sp. 383  Bacteria  normal  normal  0.723346 
 
 
-
 
CP001509  ECD_02941  fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component  35.44 
 
 
506 aa  258  2e-67  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0629  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.44 
 
 
506 aa  258  2e-67  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3253  aerotaxis receptor  35.44 
 
 
506 aa  258  2e-67  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02891  hypothetical protein  35.44 
 
 
506 aa  258  2e-67  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3527  methyl-accepting chemotaxis sensory transducer  33.85 
 
 
506 aa  258  3e-67  Enterobacter sp. 638  Bacteria  normal  normal  0.538358 
 
 
-
 
NC_010498  EcSMS35_3366  aerotaxis receptor  35.23 
 
 
506 aa  257  3e-67  Escherichia coli SMS-3-5  Bacteria  normal  0.775088  normal 
 
 
-
 
NC_007404  Tbd_2406  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.24 
 
 
566 aa  256  8e-67  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_4385  aerotaxis receptor  35.23 
 
 
506 aa  256  9e-67  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.472426  normal 
 
 
-
 
NC_009080  BMA10247_2473  methyl-accepting chemotaxis protein  35.37 
 
 
580 aa  256  1.0000000000000001e-66  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2685  methyl-accepting chemotaxis protein  35.37 
 
 
580 aa  256  1.0000000000000001e-66  Burkholderia mallei SAVP1  Bacteria  normal  0.394636  n/a   
 
 
-
 
NC_006348  BMA0264  methyl-accepting chemotaxis protein  35.37 
 
 
580 aa  256  1.0000000000000001e-66  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2390  methyl-accepting chemotaxis protein  35.37 
 
 
580 aa  256  1.0000000000000001e-66  Burkholderia mallei NCTC 10229  Bacteria  normal  0.790589  n/a   
 
 
-
 
NC_003296  RSp1224  aerotaxis sensor receptor transmembrane protein  35.69 
 
 
514 aa  254  2.0000000000000002e-66  Ralstonia solanacearum GMI1000  Bacteria  normal  0.229455  normal  0.54431 
 
 
-
 
NC_010468  EcolC_0628  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.83 
 
 
506 aa  254  3e-66  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.67 
 
 
514 aa  254  3e-66  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0760  aerotaxis sensor receptor  35.07 
 
 
583 aa  254  4.0000000000000004e-66  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5286  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.67 
 
 
519 aa  253  4.0000000000000004e-66  Delftia acidovorans SPH-1  Bacteria  normal  0.982796  normal 
 
 
-
 
NC_007434  BURPS1710b_0927  methyl-accepting chemotaxis protein  35.07 
 
 
623 aa  253  6e-66  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_3538  aerotaxis receptor  34.83 
 
 
506 aa  253  6e-66  Escherichia coli E24377A  Bacteria  normal  0.840702  n/a   
 
 
-
 
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