8 homologs were found in PanDaTox collection
for query gene Pfl01_3481 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007492  Pfl01_3481  hypothetical protein  100 
 
 
314 aa  638    Pseudomonas fluorescens Pf0-1  Bacteria  decreased coverage  0.000000000172273  normal  0.0268237 
 
 
-
 
NC_008463  PA14_22110  hypothetical protein  32.56 
 
 
319 aa  166  4e-40  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.00000000000302084  unclonable  4.28855e-22 
 
 
-
 
NC_010577  XfasM23_1020  hypothetical protein  24.83 
 
 
276 aa  79.7  0.00000000000006  Xylella fastidiosa M23  Bacteria  normal  0.673625  n/a   
 
 
-
 
NC_010513  Xfasm12_1288  hypothetical protein  24.83 
 
 
276 aa  79.3  0.00000000000009  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1257  hypothetical protein  23.89 
 
 
276 aa  77.8  0.0000000000002  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2248  hypothetical protein  21.56 
 
 
307 aa  54.3  0.000003  Ralstonia pickettii 12D  Bacteria  normal  normal  0.332155 
 
 
-
 
NC_011666  Msil_3086  hypothetical protein  21.36 
 
 
312 aa  45.8  0.0009  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007347  Reut_A2406  hypothetical protein  20.43 
 
 
322 aa  44.7  0.002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
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