More than 300 homologs were found in PanDaTox collection
for query gene Pfl01_2695 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007492  Pfl01_2695  Short-chain dehydrogenase/reductase SDR  100 
 
 
285 aa  591  1e-168  Pseudomonas fluorescens Pf0-1  Bacteria  normal  hitchhiker  0.00727931 
 
 
-
 
NC_007005  Psyr_2411  Short-chain dehydrogenase/reductase SDR  78.8 
 
 
286 aa  474  1e-133  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3001  short-chain dehydrogenase/reductase SDR  78.6 
 
 
285 aa  473  1e-132  Pseudomonas putida GB-1  Bacteria  normal  0.798039  normal 
 
 
-
 
NC_002947  PP_2723  short chain dehydrogenase/reductase family oxidoreductase  77.19 
 
 
285 aa  468  1.0000000000000001e-131  Pseudomonas putida KT2440  Bacteria  normal  0.612253  normal 
 
 
-
 
NC_004578  PSPTO_2677  oxidoreductase, short chain dehydrogenase/reductase family  77.39 
 
 
286 aa  466  9.999999999999999e-131  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.822958  n/a   
 
 
-
 
NC_009512  Pput_3031  short-chain dehydrogenase/reductase SDR  76.84 
 
 
285 aa  465  9.999999999999999e-131  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2859  short-chain dehydrogenase/reductase SDR  76.14 
 
 
285 aa  448  1e-125  Pseudomonas putida W619  Bacteria  normal  0.170147  normal  0.262214 
 
 
-
 
NC_010725  Mpop_1330  short-chain dehydrogenase/reductase SDR  65.96 
 
 
285 aa  396  1e-109  Methylobacterium populi BJ001  Bacteria  normal  normal  0.359984 
 
 
-
 
NC_007952  Bxe_B1317  Short-chain dehydrogenase  63.86 
 
 
288 aa  390  1e-107  Burkholderia xenovorans LB400  Bacteria  normal  0.169913  normal  0.0434292 
 
 
-
 
NC_010681  Bphyt_2025  short-chain dehydrogenase/reductase SDR  65.26 
 
 
288 aa  387  1e-107  Burkholderia phytofirmans PsJN  Bacteria  normal  hitchhiker  0.000209901 
 
 
-
 
NC_011757  Mchl_0766  short-chain dehydrogenase/reductase SDR  63.86 
 
 
285 aa  387  1e-106  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.717925 
 
 
-
 
NC_010172  Mext_1018  short-chain dehydrogenase/reductase SDR  63.86 
 
 
285 aa  387  1e-106  Methylobacterium extorquens PA1  Bacteria  normal  0.136189  normal 
 
 
-
 
NC_011894  Mnod_1379  short-chain dehydrogenase/reductase SDR  62.24 
 
 
286 aa  382  1e-105  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.268463  n/a   
 
 
-
 
NC_010511  M446_0844  short-chain dehydrogenase/reductase SDR  61.89 
 
 
286 aa  379  1e-104  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0919  Short-chain dehydrogenase/reductase SDR  63.16 
 
 
285 aa  380  1e-104  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1784  short-chain dehydrogenase/reductase SDR  66.42 
 
 
280 aa  378  1e-104  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.348942  normal  0.531836 
 
 
-
 
NC_009049  Rsph17029_2578  short-chain dehydrogenase/reductase SDR  62.81 
 
 
285 aa  378  1e-104  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.319892  normal  0.963036 
 
 
-
 
NC_011988  Avi_5588  dehydrogenase  62.46 
 
 
285 aa  375  1e-103  Agrobacterium vitis S4  Bacteria  normal  0.861783  n/a   
 
 
-
 
NC_010505  Mrad2831_2460  short-chain dehydrogenase/reductase SDR  63.29 
 
 
286 aa  377  1e-103  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.239121  normal 
 
 
-
 
NC_010623  Bphy_4750  short-chain dehydrogenase/reductase SDR  62.54 
 
 
288 aa  375  1e-103  Burkholderia phymatum STM815  Bacteria  normal  0.306467  normal  0.765133 
 
 
-
 
NC_009428  Rsph17025_2997  short-chain dehydrogenase/reductase SDR  61.4 
 
 
285 aa  371  1e-102  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.402229  normal  0.230445 
 
 
-
 
NC_008686  Pden_1134  short-chain dehydrogenase/reductase SDR  63.51 
 
 
285 aa  371  1e-102  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2362  short-chain dehydrogenase/reductase SDR  62.06 
 
 
286 aa  369  1e-101  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.453828  n/a   
 
 
-
 
NC_011366  Rleg2_5800  short-chain dehydrogenase/reductase SDR  61.4 
 
 
285 aa  368  1e-101  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0775551 
 
 
-
 
NC_013757  Gobs_3064  short-chain dehydrogenase/reductase SDR  64.86 
 
 
285 aa  368  1e-101  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.638488  n/a   
 
 
-
 
NC_007925  RPC_1231  short-chain dehydrogenase/reductase SDR  61.05 
 
 
285 aa  365  1e-100  Rhodopseudomonas palustris BisB18  Bacteria  normal  hitchhiker  0.0000245222 
 
 
-
 
NC_010581  Bind_2992  short-chain dehydrogenase/reductase SDR  60.35 
 
 
285 aa  364  1e-100  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6701  short-chain dehydrogenase/reductase SDR  61.05 
 
 
285 aa  367  1e-100  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.539155  normal  0.142405 
 
 
-
 
NC_007406  Nwi_2662  short-chain dehydrogenase/reductase SDR  60.56 
 
 
286 aa  361  7.0000000000000005e-99  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.392241  normal 
 
 
-
 
NC_009620  Smed_4064  short-chain dehydrogenase/reductase SDR  59.3 
 
 
285 aa  355  2.9999999999999997e-97  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_4304  short-chain dehydrogenase/reductase SDR  58.8 
 
 
311 aa  348  5e-95  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_5292  short-chain dehydrogenase/reductase SDR  60 
 
 
300 aa  348  6e-95  Spirosoma linguale DSM 74  Bacteria  normal  0.319997  normal  0.350002 
 
 
-
 
NC_007778  RPB_1505  Short-chain dehydrogenase/reductase SDR  57.75 
 
 
286 aa  347  1e-94  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.412824 
 
 
-
 
NC_012853  Rleg_5613  short-chain dehydrogenase/reductase SDR  60.42 
 
 
288 aa  345  5e-94  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.207761 
 
 
-
 
NC_008752  Aave_4486  short-chain dehydrogenase/reductase SDR  59.15 
 
 
292 aa  339  4e-92  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0684702 
 
 
-
 
NC_013061  Phep_2635  short-chain dehydrogenase/reductase SDR  60.07 
 
 
298 aa  336  1.9999999999999998e-91  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.795136 
 
 
-
 
NC_011891  A2cp1_3000  short-chain dehydrogenase/reductase SDR  56.07 
 
 
295 aa  329  3e-89  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.546475  n/a   
 
 
-
 
NC_011145  AnaeK_2906  short-chain dehydrogenase/reductase SDR  55.71 
 
 
295 aa  328  7e-89  Anaeromyxobacter sp. K  Bacteria  normal  0.0346785  n/a   
 
 
-
 
NC_010505  Mrad2831_3745  short-chain dehydrogenase/reductase SDR  56.54 
 
 
292 aa  327  9e-89  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.082877 
 
 
-
 
NC_009675  Anae109_2764  short-chain dehydrogenase/reductase SDR  56.07 
 
 
293 aa  327  1.0000000000000001e-88  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.133433  normal 
 
 
-
 
NC_007760  Adeh_2818  short-chain dehydrogenase/reductase SDR  54.64 
 
 
295 aa  322  3e-87  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2810  short-chain dehydrogenase/reductase SDR  57.24 
 
 
298 aa  314  9.999999999999999e-85  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1999  short-chain dehydrogenase/reductase SDR  53.5 
 
 
291 aa  313  1.9999999999999998e-84  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.791141  normal  0.178884 
 
 
-
 
NC_010725  Mpop_4720  short-chain dehydrogenase/reductase SDR  52.8 
 
 
290 aa  312  4.999999999999999e-84  Methylobacterium populi BJ001  Bacteria  normal  decreased coverage  0.00355451 
 
 
-
 
NC_011757  Mchl_4573  short-chain dehydrogenase/reductase SDR  52.8 
 
 
290 aa  312  4.999999999999999e-84  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0102101 
 
 
-
 
NC_010172  Mext_4203  short-chain dehydrogenase/reductase SDR  52.8 
 
 
290 aa  311  6.999999999999999e-84  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.424888 
 
 
-
 
NC_013172  Bfae_19840  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like  55.09 
 
 
297 aa  303  2.0000000000000002e-81  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1065  short-chain dehydrogenase/reductase SDR  55.07 
 
 
297 aa  301  1e-80  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010087  Bmul_5540  short-chain dehydrogenase/reductase SDR  55 
 
 
333 aa  298  5e-80  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.752467  normal  0.0103168 
 
 
-
 
NC_013730  Slin_5467  short-chain dehydrogenase/reductase SDR  52.92 
 
 
305 aa  298  9e-80  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_012853  Rleg_5903  short-chain dehydrogenase/reductase SDR  54.93 
 
 
333 aa  297  1e-79  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.828162  normal 
 
 
-
 
NC_008541  Arth_0126  short-chain dehydrogenase/reductase SDR  54.96 
 
 
298 aa  296  2e-79  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3237  short-chain dehydrogenase/reductase SDR  55.99 
 
 
308 aa  296  3e-79  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.278854  normal  0.143787 
 
 
-
 
NC_007413  Ava_2428  Short-chain dehydrogenase/reductase SDR  53.11 
 
 
285 aa  296  3e-79  Anabaena variabilis ATCC 29413  Bacteria  normal  hitchhiker  0.00441007 
 
 
-
 
NC_009664  Krad_0060  short-chain dehydrogenase/reductase SDR  53.9 
 
 
293 aa  295  5e-79  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.116516  normal  0.834143 
 
 
-
 
NC_013093  Amir_3986  short-chain dehydrogenase/reductase SDR  55.28 
 
 
297 aa  295  5e-79  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4376  Short-chain dehydrogenase/reductase SDR  52.52 
 
 
285 aa  295  6e-79  Ralstonia eutropha JMP134  Bacteria  normal  0.896027  n/a   
 
 
-
 
NC_013172  Bfae_15410  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like  56.14 
 
 
313 aa  294  1e-78  Brachybacterium faecium DSM 4810  Bacteria  normal  0.170308  n/a   
 
 
-
 
NC_012803  Mlut_06640  short-chain alcohol dehydrogenase like protein  53.17 
 
 
309 aa  293  3e-78  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6190  short-chain dehydrogenase/reductase SDR  54.26 
 
 
335 aa  291  8e-78  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1277  short-chain dehydrogenase/reductase SDR  52.16 
 
 
285 aa  291  9e-78  Mycobacterium sp. MCS  Bacteria  normal  0.716847  n/a   
 
 
-
 
NC_008705  Mkms_1294  short-chain dehydrogenase/reductase SDR  52.16 
 
 
285 aa  291  9e-78  Mycobacterium sp. KMS  Bacteria  normal  normal  0.110576 
 
 
-
 
NC_009441  Fjoh_2643  short-chain dehydrogenase/reductase SDR  51.93 
 
 
334 aa  291  1e-77  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1306  short-chain dehydrogenase/reductase SDR  52.16 
 
 
285 aa  290  1e-77  Mycobacterium sp. JLS  Bacteria  normal  0.603842  normal 
 
 
-
 
NC_011729  PCC7424_1059  short-chain dehydrogenase/reductase SDR  51.6 
 
 
284 aa  288  5.0000000000000004e-77  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.102631 
 
 
-
 
NC_013159  Svir_27180  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  51.46 
 
 
281 aa  288  8e-77  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2365  short-chain dehydrogenase/reductase SDR  53.6 
 
 
288 aa  287  1e-76  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000784864  n/a   
 
 
-
 
NC_013730  Slin_4034  short-chain dehydrogenase/reductase SDR  53.9 
 
 
335 aa  288  1e-76  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.0000556089  normal 
 
 
-
 
NC_012803  Mlut_22650  short-chain alcohol dehydrogenase like protein  53.9 
 
 
306 aa  286  2e-76  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0756  twin-arginine translocation pathway signal  52.86 
 
 
328 aa  286  2.9999999999999996e-76  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.98283  n/a   
 
 
-
 
NC_008542  Bcen2424_1237  short-chain dehydrogenase/reductase SDR  52.86 
 
 
328 aa  286  2.9999999999999996e-76  Burkholderia cenocepacia HI2424  Bacteria  normal  0.688283  n/a   
 
 
-
 
NC_013037  Dfer_2307  short-chain dehydrogenase/reductase SDR  52.3 
 
 
292 aa  286  2.9999999999999996e-76  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.381228  normal 
 
 
-
 
NC_013132  Cpin_3131  short-chain dehydrogenase/reductase SDR  52.28 
 
 
340 aa  285  5e-76  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.395332  normal  0.413116 
 
 
-
 
NC_013411  GYMC61_1520  short-chain dehydrogenase/reductase SDR  53.11 
 
 
287 aa  285  5.999999999999999e-76  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_0243  short-chain dehydrogenase/reductase SDR  51.79 
 
 
304 aa  285  7e-76  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010508  Bcenmc03_1210  short-chain dehydrogenase/reductase SDR  52.5 
 
 
337 aa  285  8e-76  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_0706  short-chain dehydrogenase/reductase SDR  52.75 
 
 
287 aa  285  8e-76  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0121  short-chain dehydrogenase/reductase SDR  53.85 
 
 
286 aa  283  2.0000000000000002e-75  Geobacter sp. M21  Bacteria  n/a    normal  0.984934 
 
 
-
 
NC_012560  Avin_11090  Short-chain dehydrogenase/reductase  50.53 
 
 
286 aa  283  3.0000000000000004e-75  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0453  short-chain dehydrogenase/reductase SDR  50.91 
 
 
284 aa  283  3.0000000000000004e-75  Spirosoma linguale DSM 74  Bacteria  normal  0.22798  normal 
 
 
-
 
NC_011146  Gbem_0138  short-chain dehydrogenase/reductase SDR  53.11 
 
 
286 aa  281  9e-75  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2925  short chain dehydrogenase/reductase family oxidoreductase  49.65 
 
 
296 aa  278  7e-74  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3838  short-chain dehydrogenase/reductase SDR  54.12 
 
 
286 aa  278  8e-74  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.066838  normal 
 
 
-
 
NC_013037  Dfer_0261  short-chain dehydrogenase/reductase SDR  53.01 
 
 
285 aa  277  1e-73  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.566144  normal 
 
 
-
 
NC_009436  Ent638_3415  oxidoreductase  49.12 
 
 
298 aa  278  1e-73  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1246  short-chain dehydrogenase/reductase SDR  54.61 
 
 
335 aa  276  3e-73  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.927114  n/a   
 
 
-
 
NC_008228  Patl_0912  short-chain dehydrogenase/reductase SDR  52.01 
 
 
299 aa  276  3e-73  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6586  short-chain dehydrogenase/reductase SDR  54.61 
 
 
335 aa  276  3e-73  Burkholderia cenocepacia HI2424  Bacteria  normal  0.830153  normal 
 
 
-
 
NC_013521  Sked_17140  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  51.09 
 
 
307 aa  275  6e-73  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.391545  normal 
 
 
-
 
NC_009439  Pmen_2306  short-chain dehydrogenase/reductase SDR  50.91 
 
 
284 aa  275  8e-73  Pseudomonas mendocina ymp  Bacteria  normal  0.361211  hitchhiker  0.00000740353 
 
 
-
 
NC_009441  Fjoh_3356  short-chain dehydrogenase/reductase SDR  49.27 
 
 
282 aa  274  1.0000000000000001e-72  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0452  short-chain dehydrogenase/reductase SDR  51.69 
 
 
287 aa  273  2.0000000000000002e-72  Spirosoma linguale DSM 74  Bacteria  normal  0.259282  normal  0.969458 
 
 
-
 
NC_009338  Mflv_1963  short-chain dehydrogenase/reductase SDR  49.64 
 
 
284 aa  273  2.0000000000000002e-72  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.757824  normal  0.126466 
 
 
-
 
NC_010557  BamMC406_6383  short-chain dehydrogenase/reductase SDR  52.65 
 
 
285 aa  273  3e-72  Burkholderia ambifaria MC40-6  Bacteria  normal  0.11398  normal  0.546447 
 
 
-
 
NC_008463  PA14_36870  putative short-chain dehydrogenase  50.94 
 
 
286 aa  273  3e-72  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_0460  short chain dehydrogenase  48.39 
 
 
291 aa  272  4.0000000000000004e-72  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3506  oxidoreductase  48.77 
 
 
294 aa  272  5.000000000000001e-72  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3405  oxidoreductase  48.77 
 
 
294 aa  272  5.000000000000001e-72  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.441834 
 
 
-
 
NC_011149  SeAg_B3331  oxidoreductase  48.77 
 
 
294 aa  272  5.000000000000001e-72  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3411  oxidoreductase  48.77 
 
 
294 aa  272  5.000000000000001e-72  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
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