8 homologs were found in PanDaTox collection
for query gene Pecwa_2840 on replicon NC_013421
Organism: Pectobacterium wasabiae WPP163



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013421  Pecwa_2840  hypothetical protein  100 
 
 
84 aa  171  3.9999999999999995e-42  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00163663  n/a   
 
 
-
 
NC_012917  PC1_2536  hypothetical protein  82.14 
 
 
84 aa  142  1e-33  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.232383  n/a   
 
 
-
 
NC_010660  SbBS512_A0191  hypothetical protein  37.68 
 
 
80 aa  44.3  0.0005  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1913  putative cytoplasmic protein  43.14 
 
 
82 aa  43.9  0.0008  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  decreased coverage  0.00000000000143129  n/a   
 
 
-
 
NC_011080  SNSL254_A1373  putative cytoplasmic protein  40 
 
 
62 aa  43.1  0.001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  unclonable  0.00000952533  hitchhiker  0.0000464837 
 
 
-
 
NC_011083  SeHA_C1388  hypothetical protein  40 
 
 
62 aa  43.1  0.001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  hitchhiker  0.00014342  normal  0.343164 
 
 
-
 
NC_011094  SeSA_A1357  putative cytoplasmic protein  40 
 
 
62 aa  43.1  0.001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  hitchhiker  0.00000106093  normal  0.554848 
 
 
-
 
NC_011205  SeD_A2094  hypothetical protein  40 
 
 
62 aa  43.1  0.001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  unclonable  0.00000279182  decreased coverage  0.0000000248657 
 
 
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