5 homologs were found in PanDaTox collection
for query gene Pden_4640 on replicon NC_008688
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008688  Pden_4640    100 
 
 
541 bp  1072    Paracoccus denitrificans PD1222  Bacteria  decreased coverage  0.00517155  normal 
 
 
-
 
NC_007511  Bcep18194_B3096  5-oxoprolinase (ATP-hydrolyzing)  85.61 
 
 
2328 bp  111  2e-22  Burkholderia sp. 383  Bacteria  normal  0.16642  normal  0.217723 
 
 
-
 
NC_007643  Rru_A3550  cobyric acid synthase  96.77 
 
 
1542 bp  54  0.00004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.831986  n/a   
 
 
-
 
NC_007951  Bxe_A1474  5-oxoprolinase (ATP-hydrolyzing)  96.43 
 
 
1983 bp  48.1  0.003  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.468362 
 
 
-
 
NC_011992  Dtpsy_1687  ABC transporter related  96.43 
 
 
711 bp  48.1  0.003  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
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