More than 300 homologs were found in PanDaTox collection
for query gene Pden_0714 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008686  Pden_0714  butyryl-CoA dehydrogenase  100 
 
 
384 aa  776    Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0684  acyl-CoA dehydrogenase domain-containing protein  49.86 
 
 
379 aa  353  2.9999999999999997e-96  Burkholderia phymatum STM815  Bacteria  normal  0.456474  normal  0.877291 
 
 
-
 
NC_010002  Daci_0142  acyl-CoA dehydrogenase domain-containing protein  47.86 
 
 
383 aa  330  2e-89  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.223595 
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  44.65 
 
 
379 aa  305  6e-82  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  42.59 
 
 
379 aa  299  5e-80  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  44.12 
 
 
380 aa  299  6e-80  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010678  Rpic_3973  acyl-CoA dehydrogenase domain protein  43.68 
 
 
377 aa  290  2e-77  Ralstonia pickettii 12J  Bacteria  normal  0.78306  normal  0.788161 
 
 
-
 
NC_012857  Rpic12D_4086  acyl-CoA dehydrogenase domain protein  43.68 
 
 
377 aa  290  2e-77  Ralstonia pickettii 12D  Bacteria  normal  0.303595  normal  0.349393 
 
 
-
 
NC_013440  Hoch_3775  acyl-CoA dehydrogenase domain protein  43.39 
 
 
386 aa  289  6e-77  Haliangium ochraceum DSM 14365  Bacteria  normal  0.212433  normal  0.155443 
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  40.53 
 
 
379 aa  287  2e-76  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  43.47 
 
 
379 aa  286  2.9999999999999996e-76  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  40.79 
 
 
381 aa  286  5e-76  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0934  acyl-CoA dehydrogenase domain-containing protein  40.68 
 
 
387 aa  286  5.999999999999999e-76  Salinispora tropica CNB-440  Bacteria  normal  normal  0.496704 
 
 
-
 
NC_007348  Reut_B4257  butyryl-CoA dehydrogenase  42.97 
 
 
377 aa  284  1.0000000000000001e-75  Ralstonia eutropha JMP134  Bacteria  normal  0.725306  n/a   
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  42.18 
 
 
379 aa  284  2.0000000000000002e-75  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  42.18 
 
 
379 aa  284  2.0000000000000002e-75  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1029  acyl-CoA dehydrogenase domain protein  40.74 
 
 
387 aa  283  4.0000000000000003e-75  Gordonia bronchialis DSM 43247  Bacteria  normal  0.239684  n/a   
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  40.68 
 
 
379 aa  283  5.000000000000001e-75  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  41.44 
 
 
379 aa  282  6.000000000000001e-75  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  42.18 
 
 
379 aa  282  6.000000000000001e-75  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_009674  Bcer98_3862  acyl-CoA dehydrogenase domain-containing protein  42.71 
 
 
379 aa  281  1e-74  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0876  acyl-CoA dehydrogenase domain-containing protein  40.16 
 
 
387 aa  281  2e-74  Salinispora arenicola CNS-205  Bacteria  normal  0.189497  normal  0.119821 
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  41.91 
 
 
379 aa  280  2e-74  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2279  acyl-CoA dehydrogenase domain-containing protein  41.76 
 
 
383 aa  281  2e-74  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  40.91 
 
 
379 aa  280  3e-74  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_010676  Bphyt_5650  acyl-CoA dehydrogenase domain protein  42.36 
 
 
377 aa  280  3e-74  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  41.91 
 
 
379 aa  280  3e-74  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  41.91 
 
 
379 aa  280  4e-74  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4115  acyl-CoA dehydrogenase domain protein  39.95 
 
 
390 aa  279  5e-74  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2589  acyl-CoA dehydrogenase domain protein  39.95 
 
 
390 aa  279  5e-74  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000683478  n/a   
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  41.91 
 
 
379 aa  279  6e-74  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2865  acyl-CoA dehydrogenase domain protein  43.5 
 
 
389 aa  279  7e-74  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2436  acyl-CoA dehydrogenase domain-containing protein  42.02 
 
 
383 aa  279  7e-74  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2885  acyl-CoA dehydrogenase domain-containing protein  42.29 
 
 
383 aa  278  9e-74  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  41.18 
 
 
379 aa  278  1e-73  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3574  putative acyl-CoA dehydrogenase  41.49 
 
 
377 aa  278  1e-73  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2584  butyryl-CoA dehydrogenase  39.15 
 
 
379 aa  278  1e-73  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2286  butyryl-CoA dehydrogenase  39.15 
 
 
379 aa  278  1e-73  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3492  acyl-CoA dehydrogenase domain-containing protein  41.22 
 
 
383 aa  277  3e-73  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1084  butyryl-CoA dehydrogenase  42.02 
 
 
377 aa  276  3e-73  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0155468 
 
 
-
 
NC_007953  Bxe_C0247  Acyl-CoA dehydrogenase  41.01 
 
 
378 aa  277  3e-73  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS05570  acyl-CoA dehydrogenase oxidoreductase protein  43.42 
 
 
377 aa  276  4e-73  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.213032 
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  38.52 
 
 
402 aa  276  5e-73  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_014165  Tbis_0714  acyl-CoA dehydrogenase domain-containing protein  42.06 
 
 
388 aa  276  6e-73  Thermobispora bispora DSM 43833  Bacteria  normal  0.114203  normal  0.0860013 
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  38.67 
 
 
379 aa  275  8e-73  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
NC_014212  Mesil_0067  acyl-CoA dehydrogenase domain protein  42.49 
 
 
394 aa  275  1.0000000000000001e-72  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3656  acyl-CoA dehydrogenase domain-containing protein  42.55 
 
 
377 aa  274  2.0000000000000002e-72  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2865  Acyl-CoA dehydrogenase-like  42.02 
 
 
383 aa  274  2.0000000000000002e-72  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0509295  normal  0.212771 
 
 
-
 
NC_009675  Anae109_2136  acyl-CoA dehydrogenase domain-containing protein  41.53 
 
 
380 aa  274  2.0000000000000002e-72  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.281355 
 
 
-
 
NC_013946  Mrub_0264  acyl-CoA dehydrogenase domain-containing protein  41.75 
 
 
394 aa  274  2.0000000000000002e-72  Meiothermus ruber DSM 1279  Bacteria  normal  0.0644181  normal  0.99067 
 
 
-
 
NC_009767  Rcas_0249  acyl-CoA dehydrogenase domain-containing protein  42.15 
 
 
383 aa  274  2.0000000000000002e-72  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.538468  normal  0.417839 
 
 
-
 
NC_009523  RoseRS_0319  acyl-CoA dehydrogenase domain-containing protein  42.93 
 
 
383 aa  274  2.0000000000000002e-72  Roseiflexus sp. RS-1  Bacteria  normal  0.339666  normal  0.0442463 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  40.8 
 
 
377 aa  274  2.0000000000000002e-72  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  37.47 
 
 
379 aa  273  3e-72  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1058  acyl-CoA dehydrogenase domain protein  39.37 
 
 
386 aa  273  3e-72  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.405365  n/a   
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  40.63 
 
 
380 aa  273  3e-72  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0714  Acyl-CoA dehydrogenase  41.76 
 
 
377 aa  273  4.0000000000000004e-72  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3404  acyl-CoA dehydrogenase-like  42.29 
 
 
377 aa  273  5.000000000000001e-72  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4963  acyl-CoA dehydrogenase domain-containing protein  42.29 
 
 
377 aa  273  5.000000000000001e-72  Burkholderia cenocepacia HI2424  Bacteria  normal  0.398605  normal  0.378723 
 
 
-
 
NC_013131  Caci_4530  acyl-CoA dehydrogenase domain protein  38.74 
 
 
389 aa  273  5.000000000000001e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.335652  normal  0.412983 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  41.18 
 
 
376 aa  272  6e-72  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  41.27 
 
 
376 aa  272  7e-72  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5323  acyl-CoA dehydrogenase domain-containing protein  42.29 
 
 
377 aa  272  8.000000000000001e-72  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.00118834  normal  0.0149252 
 
 
-
 
NC_008687  Pden_2906  acyl-CoA dehydrogenase domain-containing protein  42.22 
 
 
375 aa  272  9e-72  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  37.73 
 
 
379 aa  271  1e-71  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010623  Bphy_5126  acyl-CoA dehydrogenase domain-containing protein  41.02 
 
 
377 aa  270  2.9999999999999997e-71  Burkholderia phymatum STM815  Bacteria  normal  normal  0.393324 
 
 
-
 
NC_011368  Rleg2_4384  acyl-CoA dehydrogenase domain protein  41.01 
 
 
375 aa  270  2.9999999999999997e-71  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.17615  normal 
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  41.4 
 
 
376 aa  270  4e-71  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  41.07 
 
 
378 aa  270  4e-71  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  41.4 
 
 
376 aa  270  4e-71  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4904  acyl-CoA dehydrogenase domain-containing protein  41.49 
 
 
377 aa  270  4e-71  Burkholderia ambifaria MC40-6  Bacteria  normal  0.316996  normal  0.149852 
 
 
-
 
NC_008391  Bamb_4385  acyl-CoA dehydrogenase domain-containing protein  41.49 
 
 
377 aa  269  5.9999999999999995e-71  Burkholderia ambifaria AMMD  Bacteria  normal  0.351154  normal  0.113053 
 
 
-
 
NC_011831  Cagg_0202  acyl-CoA dehydrogenase domain protein  44.18 
 
 
382 aa  269  5.9999999999999995e-71  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221874  normal 
 
 
-
 
NC_009675  Anae109_2137  acyl-CoA dehydrogenase domain-containing protein  43.01 
 
 
382 aa  269  7e-71  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.545271  normal  0.220827 
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  39.95 
 
 
382 aa  268  8e-71  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_011145  AnaeK_2193  acyl-CoA dehydrogenase domain protein  43.12 
 
 
382 aa  269  8e-71  Anaeromyxobacter sp. K  Bacteria  normal  0.918821  n/a   
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  41.4 
 
 
376 aa  268  8.999999999999999e-71  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  41.4 
 
 
376 aa  268  8.999999999999999e-71  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  41.4 
 
 
376 aa  268  1e-70  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  37.2 
 
 
379 aa  268  1e-70  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1697  acyl-CoA dehydrogenase domain protein  39.95 
 
 
386 aa  268  2e-70  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0868604  normal 
 
 
-
 
NC_012854  Rleg_6504  acyl-CoA dehydrogenase domain protein  40.63 
 
 
375 aa  267  2e-70  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.285028  normal  0.547313 
 
 
-
 
NC_009616  Tmel_0656  acyl-CoA dehydrogenase domain-containing protein  37.89 
 
 
380 aa  267  2e-70  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  41.13 
 
 
381 aa  267  2e-70  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  41.13 
 
 
381 aa  267  2e-70  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_013093  Amir_6366  acyl-CoA dehydrogenase domain protein  38.06 
 
 
387 aa  268  2e-70  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  41.13 
 
 
376 aa  267  2.9999999999999995e-70  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  41.13 
 
 
381 aa  267  2.9999999999999995e-70  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_013235  Namu_4214  acyl-CoA dehydrogenase domain protein  39.06 
 
 
386 aa  267  2.9999999999999995e-70  Nakamurella multipartita DSM 44233  Bacteria  normal  0.234142  normal  0.067843 
 
 
-
 
NC_007777  Francci3_1549  butyryl-CoA dehydrogenase  39.58 
 
 
387 aa  266  4e-70  Frankia sp. CcI3  Bacteria  normal  0.431805  normal 
 
 
-
 
NC_007650  BTH_II1803  acyl-CoA dehydrogenase  40.96 
 
 
377 aa  266  5e-70  Burkholderia thailandensis E264  Bacteria  normal  0.545777  n/a   
 
 
-
 
NC_011145  AnaeK_2192  acyl-CoA dehydrogenase domain protein  41.8 
 
 
380 aa  265  1e-69  Anaeromyxobacter sp. K  Bacteria  normal  0.516178  n/a   
 
 
-
 
NC_013411  GYMC61_3451  acyl-CoA dehydrogenase domain protein  43.65 
 
 
377 aa  265  1e-69  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_2037  acyl-CoA dehydrogenase domain-containing protein  41.38 
 
 
375 aa  264  2e-69  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.666233 
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  39.15 
 
 
380 aa  264  2e-69  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4743  butyryl-CoA dehydrogenase  38.38 
 
 
417 aa  264  2e-69  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3683  acyl-CoA dehydrogenase domain-containing protein  40.21 
 
 
384 aa  263  3e-69  Burkholderia phymatum STM815  Bacteria  normal  normal  0.685138 
 
 
-
 
NC_009720  Xaut_4666  acyl-CoA dehydrogenase domain-containing protein  41.64 
 
 
375 aa  263  3e-69  Xanthobacter autotrophicus Py2  Bacteria  normal  0.815528  normal  0.395379 
 
 
-
 
NC_007333  Tfu_0068  putative acyl-CoA dehydrogenase  39.95 
 
 
391 aa  263  3e-69  Thermobifida fusca YX  Bacteria  normal  0.544206  n/a   
 
 
-
 
NC_009379  Pnuc_1555  acyl-CoA dehydrogenase domain-containing protein  40.11 
 
 
383 aa  263  3e-69  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
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