More than 300 homologs were found in PanDaTox collection
for query gene Pcryo_0097 on replicon NC_007969
Organism: Psychrobacter cryohalolentis K5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007969  Pcryo_0097  LytR/AlgR family transcriptional regulator  100 
 
 
245 aa  497  1e-140  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_6007  alginate biosynthesis regulatory protein AlgR  44.76 
 
 
248 aa  224  1e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  0.404994  n/a   
 
 
-
 
NC_009439  Pmen_0279  two-component response regulator AlgR  44.76 
 
 
248 aa  222  3e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_69470  alginate biosynthesis regulatory protein AlgR  44.35 
 
 
248 aa  222  4e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.184834  normal 
 
 
-
 
NC_007005  Psyr_0063  response regulator receiver:LytTr DNA-binding region  43.55 
 
 
248 aa  221  7e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0127  alginate biosynthesis regulatory protein AlgR  43.15 
 
 
248 aa  220  1.9999999999999999e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3668  two-component response regulator AlgR  47.15 
 
 
243 aa  218  8.999999999999998e-56  Saccharophagus degradans 2-40  Bacteria  decreased coverage  0.00827536  normal  0.334671 
 
 
-
 
NC_007492  Pfl01_5488  two-component response regulator AlgR  43.55 
 
 
248 aa  216  2e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0488  response regulator receiver protein  44.63 
 
 
252 aa  213  1.9999999999999998e-54  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0031  response regulator receiver protein  43.5 
 
 
243 aa  213  2.9999999999999995e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2671  response regulator receiver protein  44.72 
 
 
243 aa  206  3e-52  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  hitchhiker  0.000000000586434 
 
 
-
 
NC_012560  Avin_47610  encystment and alginate biosynthesis response regulator; AlgR  42.11 
 
 
251 aa  203  2e-51  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0207  LytTR family two component transcriptional regulator  41.13 
 
 
247 aa  199  5e-50  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0210  LytTR family two component transcriptional regulator  41.13 
 
 
247 aa  199  5e-50  Pseudomonas putida GB-1  Bacteria  normal  0.375452  normal 
 
 
-
 
NC_002947  PP_0185  LytTR family two component transcriptional regulator  41.13 
 
 
247 aa  197  9e-50  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0255  LytTR family two component transcriptional regulator  40.73 
 
 
247 aa  194  1e-48  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_04138  two-component system regulatory protein  39.02 
 
 
245 aa  178  8e-44  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.739319  n/a   
 
 
-
 
NC_010513  Xfasm12_1259  response regulator receiver protein  38.78 
 
 
252 aa  167  1e-40  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1226  LytTR family two component transcriptional regulator  38.37 
 
 
252 aa  165  5.9999999999999996e-40  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0231  LytR/AlgR family transcriptional regulator  38 
 
 
254 aa  160  2e-38  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.740894 
 
 
-
 
NC_007947  Mfla_0036  LytR/AlgR family transcriptional regulator  38.71 
 
 
248 aa  160  2e-38  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3679  LytR/AlgR family transcriptional regulator  36.43 
 
 
262 aa  159  5e-38  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3531  two component transcriptional regulator, LytTR family  38.21 
 
 
243 aa  145  4.0000000000000006e-34  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01918  putative response regulator in two-component regulatory system  35.25 
 
 
275 aa  145  7.0000000000000006e-34  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.159199  n/a   
 
 
-
 
NC_013889  TK90_0013  two component transcriptional regulator, LytTR family  35.15 
 
 
241 aa  144  9e-34  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.349161 
 
 
-
 
NC_007948  Bpro_3670  LytR/AlgR family transcriptional regulator  33.86 
 
 
246 aa  141  9.999999999999999e-33  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1860  two component transcriptional regulator, LytTR family  35.46 
 
 
266 aa  141  9.999999999999999e-33  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000974  response regulator of the LytR/AlgR family  35.34 
 
 
263 aa  138  8.999999999999999e-32  Vibrio sp. Ex25  Bacteria  normal  0.728867  n/a   
 
 
-
 
NC_009784  VIBHAR_07024  transcriptional regulator  34.94 
 
 
263 aa  136  2e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010730  SYO3AOP1_0715  two component transcriptional regulator, LytTR family  34.13 
 
 
245 aa  135  8e-31  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00500528  n/a   
 
 
-
 
NC_008825  Mpe_A1113  LytR/AlgR family transcriptional regulator  32.68 
 
 
256 aa  131  1.0000000000000001e-29  Methylibium petroleiphilum PM1  Bacteria  normal  0.45992  normal  0.29087 
 
 
-
 
NC_008228  Patl_2385  response regulator receiver protein  33.83 
 
 
272 aa  129  4.0000000000000003e-29  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1435  two component transcriptional regulator, LytTR family  33.46 
 
 
264 aa  127  1.0000000000000001e-28  Thauera sp. MZ1T  Bacteria  normal  0.314663  n/a   
 
 
-
 
NC_013203  Apar_1323  two component transcriptional regulator, LytTR family  33.06 
 
 
237 aa  127  2.0000000000000002e-28  Atopobium parvulum DSM 20469  Bacteria  normal  0.0540721  normal  0.0273831 
 
 
-
 
NC_008786  Veis_2880  response regulator receiver protein  32.16 
 
 
253 aa  127  2.0000000000000002e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.313062  normal  0.0817302 
 
 
-
 
NC_011071  Smal_0421  two component transcriptional regulator, LytTR family  33.73 
 
 
256 aa  126  3e-28  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.268274 
 
 
-
 
NC_010002  Daci_5318  LytTR family two component transcriptional regulator  35.27 
 
 
253 aa  126  3e-28  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.541549 
 
 
-
 
NC_008781  Pnap_3096  response regulator receiver protein  33.47 
 
 
247 aa  125  6e-28  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0387  response regulator  31.47 
 
 
261 aa  125  6e-28  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1381  LytR/AlgR family transcriptional regulator  30.92 
 
 
273 aa  125  8.000000000000001e-28  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.557466 
 
 
-
 
NC_010571  Oter_3913  LytTR family two component transcriptional regulator  31.54 
 
 
268 aa  124  1e-27  Opitutus terrae PB90-1  Bacteria  normal  0.316099  normal 
 
 
-
 
NC_010524  Lcho_3089  LytTR family two component transcriptional regulator  32.71 
 
 
278 aa  123  2e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008782  Ajs_3314  LytR/AlgR family transcriptional regulator  32.94 
 
 
250 aa  124  2e-27  Acidovorax sp. JS42  Bacteria  normal  0.742064  normal  0.13531 
 
 
-
 
NC_009708  YpsIP31758_3221  putative two-component response-regulatory protein YehT  32.93 
 
 
238 aa  122  4e-27  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3358  putative two-component response-regulatory protein YehT  33.33 
 
 
238 aa  122  7e-27  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3485  putative two-component response-regulatory protein YehT  33.33 
 
 
238 aa  122  7e-27  Yersinia pestis Angola  Bacteria  normal  normal  0.159726 
 
 
-
 
NC_013422  Hneap_2149  two component transcriptional regulator, LytTR family  32.65 
 
 
234 aa  120  9.999999999999999e-27  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00472108  n/a   
 
 
-
 
NC_009483  Gura_2443  LytTR family two component transcriptional regulator  32.79 
 
 
279 aa  121  9.999999999999999e-27  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0765  LytR/AlgR family transcriptional regulator  29.1 
 
 
247 aa  119  3e-26  Psychrobacter cryohalolentis K5  Bacteria  normal  0.584976  normal  0.255142 
 
 
-
 
NC_013061  Phep_1542  LytTr DNA-binding region  33.75 
 
 
245 aa  120  3e-26  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.300206 
 
 
-
 
NC_010571  Oter_2329  LytTR family two component transcriptional regulator  34.33 
 
 
255 aa  119  4.9999999999999996e-26  Opitutus terrae PB90-1  Bacteria  normal  0.0531557  decreased coverage  0.00207881 
 
 
-
 
NC_010658  SbBS512_E0865  putative two-component response-regulatory protein YehT  31.97 
 
 
239 aa  119  6e-26  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6586  two component transcriptional regulator, LytTR family  32.58 
 
 
246 aa  119  6e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.318104  normal 
 
 
-
 
CP001509  ECD_02054  predicted response regulator in two-component system withYehU  32.38 
 
 
239 aa  118  7e-26  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1533  two component transcriptional regulator, LytTR family  32.38 
 
 
239 aa  118  7e-26  Escherichia coli DH1  Bacteria  normal  0.726215  n/a   
 
 
-
 
NC_009801  EcE24377A_2413  putative two-component response-regulatory protein YehT  32.38 
 
 
239 aa  118  7e-26  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1522  putative two-component response-regulatory protein YehT  32.38 
 
 
239 aa  118  7e-26  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_3112  putative two-component response-regulatory protein YehT  32.38 
 
 
239 aa  118  7e-26  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.148941 
 
 
-
 
NC_009800  EcHS_A2259  putative two-component response-regulatory protein YehT  32.38 
 
 
239 aa  118  7e-26  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02012  hypothetical protein  32.38 
 
 
239 aa  118  7e-26  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0137  two component transcriptional regulator, LytTR family  31.25 
 
 
237 aa  118  7.999999999999999e-26  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01160  response regulator of the LytR/AlgR family  32.39 
 
 
238 aa  118  9.999999999999999e-26  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_0919  putative two-component response-regulatory protein YehT  32.38 
 
 
239 aa  118  9.999999999999999e-26  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1965  response regulator receiver:LytTr DNA-binding region  31.09 
 
 
273 aa  117  9.999999999999999e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.864475  n/a   
 
 
-
 
NC_011899  Hore_10420  two component transcriptional regulator, LytTR family  31.2 
 
 
253 aa  117  9.999999999999999e-26  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000460621  n/a   
 
 
-
 
NC_009436  Ent638_2723  putative two-component response-regulatory protein YehT  31.97 
 
 
239 aa  117  1.9999999999999998e-25  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1548  putative two-component response-regulatory protein YehT  33.33 
 
 
236 aa  117  1.9999999999999998e-25  Shewanella putrefaciens CN-32  Bacteria  normal  0.496368  n/a   
 
 
-
 
NC_013165  Shel_00400  response regulator of the LytR/AlgR family  31.97 
 
 
237 aa  116  3.9999999999999997e-25  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.132657  normal 
 
 
-
 
NC_003910  CPS_1819  LytTr DNA-binding response regulator  29.83 
 
 
260 aa  115  5e-25  Colwellia psychrerythraea 34H  Bacteria  normal  0.148301  n/a   
 
 
-
 
NC_011992  Dtpsy_2666  two component transcriptional regulator, LytTR family  33.33 
 
 
250 aa  115  5e-25  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2393  putative two-component response-regulatory protein YehT  31.56 
 
 
239 aa  114  1.0000000000000001e-24  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2348  putative two-component response-regulatory protein YehT  31.56 
 
 
239 aa  114  1.0000000000000001e-24  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2858  response regulator receiver  32 
 
 
264 aa  114  1.0000000000000001e-24  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2304  putative two-component response-regulatory protein YehT  31.56 
 
 
239 aa  114  1.0000000000000001e-24  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2505  putative two-component response-regulatory protein YehT  31.56 
 
 
239 aa  114  1.0000000000000001e-24  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A2397  putative two-component response-regulatory protein YehT  31.56 
 
 
239 aa  114  1.0000000000000001e-24  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.423362  normal 
 
 
-
 
NC_008752  Aave_1947  LytR/AlgR family transcriptional regulator  32.27 
 
 
248 aa  114  1.0000000000000001e-24  Acidovorax citrulli AAC00-1  Bacteria  normal  0.298927  decreased coverage  0.00301393 
 
 
-
 
NC_011886  Achl_1393  two component transcriptional regulator, LytTR family  32.24 
 
 
238 aa  114  2.0000000000000002e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000000160197 
 
 
-
 
NC_010571  Oter_0704  LytTR family two component transcriptional regulator  29.12 
 
 
276 aa  113  2.0000000000000002e-24  Opitutus terrae PB90-1  Bacteria  normal  normal  0.674394 
 
 
-
 
NC_010571  Oter_2328  LytTR family two component transcriptional regulator  32.14 
 
 
255 aa  114  2.0000000000000002e-24  Opitutus terrae PB90-1  Bacteria  normal  0.261765  decreased coverage  0.00199939 
 
 
-
 
NC_007644  Moth_1964  LytR/AlgR family transcriptional regulator  31.42 
 
 
255 aa  111  1.0000000000000001e-23  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.777054 
 
 
-
 
NC_008255  CHU_0254  response regulator  33.18 
 
 
251 aa  110  1.0000000000000001e-23  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.437869  normal 
 
 
-
 
NC_009654  Mmwyl1_3341  putative two-component response-regulatory protein YehT  32.14 
 
 
244 aa  111  1.0000000000000001e-23  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.798853 
 
 
-
 
NC_013132  Cpin_0671  two component transcriptional regulator, LytTR family  31.42 
 
 
251 aa  110  2.0000000000000002e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_4386  two component transcriptional regulator, LytTR family  33.05 
 
 
260 aa  110  2.0000000000000002e-23  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1227  two component transcriptional regulator, LytTR family  28.3 
 
 
277 aa  110  3e-23  Ralstonia pickettii 12J  Bacteria  normal  0.299238  normal  0.813842 
 
 
-
 
NC_009457  VC0395_A0224  putative two-component response-regulatory protein YehT  30.74 
 
 
237 aa  110  3e-23  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_4495  LytTR family two component transcriptional regulator  31.84 
 
 
245 aa  109  3e-23  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.17015 
 
 
-
 
NC_013501  Rmar_2186  two component transcriptional regulator, LytTR family  31.02 
 
 
275 aa  110  3e-23  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1246  LytTR family two component transcriptional regulator  33.64 
 
 
254 aa  109  4.0000000000000004e-23  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1290  two component transcriptional regulator, LytTR family  28.68 
 
 
277 aa  109  4.0000000000000004e-23  Ralstonia pickettii 12D  Bacteria  normal  normal  0.212023 
 
 
-
 
NC_009253  Dred_2957  response regulator receiver protein  29.34 
 
 
236 aa  109  4.0000000000000004e-23  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00954821  n/a   
 
 
-
 
NC_008009  Acid345_3291  LytR/AlgR family transcriptional regulator  25.64 
 
 
258 aa  108  6e-23  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.393667  normal 
 
 
-
 
NC_013037  Dfer_1004  two component transcriptional regulator, LytTR family  30.3 
 
 
257 aa  108  8.000000000000001e-23  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.00878343  normal  0.279198 
 
 
-
 
NC_007650  BTH_II1400  response regulator  32.64 
 
 
243 aa  108  8.000000000000001e-23  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3405  LytTR family two component transcriptional regulator  28 
 
 
244 aa  108  8.000000000000001e-23  Serratia proteamaculans 568  Bacteria  normal  0.732179  normal 
 
 
-
 
NC_012880  Dd703_0957  putative two-component response-regulatory protein YehT  31.23 
 
 
241 aa  108  9.000000000000001e-23  Dickeya dadantii Ech703  Bacteria  normal  0.147856  n/a   
 
 
-
 
NC_011071  Smal_0617  two component transcriptional regulator, LytTR family  30.36 
 
 
243 aa  108  9.000000000000001e-23  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.23864 
 
 
-
 
NC_012912  Dd1591_0959  putative two-component response-regulatory protein YehT  32.65 
 
 
241 aa  108  1e-22  Dickeya zeae Ech1591  Bacteria  normal  0.606019  n/a   
 
 
-
 
NC_009441  Fjoh_5028  LytTR family two component transcriptional regulator  28.51 
 
 
237 aa  108  1e-22  Flavobacterium johnsoniae UW101  Bacteria  normal  0.967214  n/a   
 
 
-
 
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