12 homologs were found in PanDaTox collection
for query gene Pcar_3198 on replicon NC_007498
Organism: Pelobacter carbinolicus DSM 2380



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007498  Pcar_3198  hypothetical protein  100 
 
 		 73 aa  149  1e-35  Pelobacter carbinolicus DSM 2380  Bacteria  decreased coverage  0.0000000000000508147  n/a   
 
 
-
 
NC_010814  Glov_2853  putative transcriptional regulator, XRE family  35.62 
 
 		 86 aa  61.6  0.000000004  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_2358  hypothetical protein  38.36 
 
 		 78 aa  57  0.00000009  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0000081812  decreased coverage  0.0000157362 
 
 
-
 
NC_013385  Adeg_0418  transcriptional regulator, XRE family  29.33 
 
 		 77 aa  49.3  0.00002  Ammonifex degensii KC4  Bacteria  hitchhiker  0.0000000007588  n/a   
 
 
-
 
NC_008577  Shewana3_2024  hypothetical protein  29.73 
 
 		 74 aa  47  0.00008  Shewanella sp. ANA-3  Bacteria  normal  0.217828  decreased coverage  0.000000018107 
 
 
-
 
NC_011663  Sbal223_2136  putative transcriptional regulator, XRE family  29.73 
 
 		 74 aa  46.6  0.0001  Shewanella baltica OS223  Bacteria  normal  0.0605144  normal  1 
 
 
-
 
NC_007298  Daro_1322  hypothetical protein  24.66 
 
 		 84 aa  43.9  0.0007  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000117292  normal  0.0168857 
 
 
-
 
NC_008757  Pnap_4286  Cro/CI family transcriptional regulator  30.88 
 
 		 73 aa  43.9  0.0007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009674  Bcer98_2262  XRE family transcriptional regulator  30 
 
 		 68 aa  40.4  0.008  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.914675  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2804  XRE family transcriptional regulator  31.48 
 
 		 75 aa  40  0.01  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.425929  n/a   
 
 
-
 
NC_010814  Glov_0100  transcriptional regulator, XRE family  29.63 
 
 		 70 aa  40  0.01  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_013158  Huta_0759  transcriptional regulator, XRE family  30.91 
 
 		 70 aa  40  0.01  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
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