More than 300 homologs were found in PanDaTox collection
for query gene Patl_2141 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_4948  acyl-CoA dehydrogenase domain-containing protein  54.82 
 
 
600 aa  670    Pseudomonas putida KT2440  Bacteria  normal  0.669366  normal 
 
 
-
 
NC_009439  Pmen_0561  acyl-CoA dehydrogenase domain-containing protein  53.73 
 
 
622 aa  664    Pseudomonas mendocina ymp  Bacteria  normal  hitchhiker  0.00000000252916 
 
 
-
 
NC_004578  PSPTO_5020  acyl-CoA dehydrogenase family protein  55.15 
 
 
600 aa  687    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0505  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  55.81 
 
 
600 aa  697    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01005  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  67.43 
 
 
611 aa  870    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2868  acyl-CoA dehydrogenase domain-containing protein  52.74 
 
 
602 aa  651    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0451  Acyl-CoA dehydrogenase-like  56.31 
 
 
600 aa  698    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.821544  normal 
 
 
-
 
NC_009512  Pput_4821  acyl-CoA dehydrogenase domain-containing protein  54.82 
 
 
600 aa  671    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2845  acyl-CoA dehydrogenase domain-containing protein  59.23 
 
 
600 aa  763    Marinobacter aquaeolei VT8  Bacteria  normal  0.26253  n/a   
 
 
-
 
NC_008463  PA14_66350  putative acyl-CoA dehydrogenase  54.65 
 
 
600 aa  681    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4997  acyl-CoA dehydrogenase domain-containing protein  55.56 
 
 
600 aa  676    Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0517  acyl-CoA dehydrogenase domain-containing protein  55.22 
 
 
600 aa  672    Pseudomonas putida W619  Bacteria  normal  0.0563795  normal  0.38064 
 
 
-
 
NC_007969  Pcryo_0861  acyl-CoA dehydrogenase-like  60.83 
 
 
601 aa  759    Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5032  acyl-CoA dehydrogenase domain protein  53.09 
 
 
601 aa  639    Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.690717 
 
 
-
 
NC_008228  Patl_2141  acyl-CoA dehydrogenase-like  100 
 
 
616 aa  1285    Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1004  acyl-CoA dehydrogenase domain-containing protein  61.96 
 
 
601 aa  793    Psychrobacter sp. PRwf-1  Bacteria  normal  hitchhiker  0.0000430658 
 
 
-
 
NC_009656  PSPA7_5757  putative acyl-CoA dehydrogenase  54.65 
 
 
600 aa  680    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4675  acyl-CoA dehydrogenase domain protein  51.4 
 
 
597 aa  600  1e-170  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1227  acyl-CoA dehydrogenase domain protein  50 
 
 
599 aa  582  1.0000000000000001e-165  Thermomonospora curvata DSM 43183  Bacteria  normal  0.556988  n/a   
 
 
-
 
NC_010682  Rpic_1444  acyl-CoA dehydrogenase domain protein  49.6 
 
 
622 aa  581  1e-164  Ralstonia pickettii 12J  Bacteria  normal  normal  0.0386828 
 
 
-
 
NC_008345  Sfri_2066  acyl-CoA dehydrogenase domain-containing protein  47.63 
 
 
601 aa  580  1e-164  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1762  acyl-CoA dehydrogenase oxidoreductase protein  49.12 
 
 
625 aa  578  1.0000000000000001e-163  Ralstonia solanacearum GMI1000  Bacteria  normal  0.492096  normal  0.209412 
 
 
-
 
NC_012856  Rpic12D_1485  acyl-CoA dehydrogenase domain protein  49.28 
 
 
622 aa  575  1.0000000000000001e-163  Ralstonia pickettii 12D  Bacteria  normal  0.275641  normal  0.0574258 
 
 
-
 
NC_008705  Mkms_0119  acyl-CoA dehydrogenase domain-containing protein  48.93 
 
 
588 aa  564  1.0000000000000001e-159  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0234574 
 
 
-
 
NC_009077  Mjls_0100  acyl-CoA dehydrogenase domain-containing protein  48.93 
 
 
588 aa  563  1.0000000000000001e-159  Mycobacterium sp. JLS  Bacteria  normal  normal  0.119602 
 
 
-
 
NC_008146  Mmcs_0110  acyl-CoA dehydrogenase-like protein  48.93 
 
 
588 aa  564  1.0000000000000001e-159  Mycobacterium sp. MCS  Bacteria  normal  0.242894  n/a   
 
 
-
 
NC_008010  Dgeo_2405  acyl-CoA dehydrogenase-like  48.69 
 
 
598 aa  561  1e-158  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2720  acyl-CoA dehydrogenase domain-containing protein  49.4 
 
 
592 aa  557  1e-157  Meiothermus ruber DSM 1279  Bacteria  normal  0.78242  normal 
 
 
-
 
NC_007973  Rmet_1852  acyl-CoA dehydrogenase-like protein  49.51 
 
 
619 aa  552  1e-156  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.232086 
 
 
-
 
NC_013441  Gbro_3567  acyl-CoA dehydrogenase domain protein  48.27 
 
 
591 aa  550  1e-155  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1408  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.21 
 
 
618 aa  551  1e-155  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7558  Acyl-CoA dehydrogenase  46.9 
 
 
607 aa  535  1e-151  Burkholderia sp. 383  Bacteria  normal  0.0382442  normal  0.166512 
 
 
-
 
NC_010508  Bcenmc03_1320  acyl-CoA dehydrogenase domain-containing protein  46.92 
 
 
609 aa  530  1e-149  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.895638 
 
 
-
 
NC_007510  Bcep18194_A4473  Acyl-CoA dehydrogenase  46.76 
 
 
609 aa  529  1e-149  Burkholderia sp. 383  Bacteria  normal  0.398734  normal 
 
 
-
 
NC_014210  Ndas_1582  acyl-CoA dehydrogenase domain protein  48.91 
 
 
598 aa  530  1e-149  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.900007  decreased coverage  0.00956274 
 
 
-
 
NC_010551  BamMC406_1258  acyl-CoA dehydrogenase domain-containing protein  47.65 
 
 
609 aa  521  1e-146  Burkholderia ambifaria MC40-6  Bacteria  normal  0.594087  normal 
 
 
-
 
NC_009484  Acry_1573  acyl-CoA dehydrogenase domain-containing protein  47.83 
 
 
599 aa  520  1e-146  Acidiphilium cryptum JF-5  Bacteria  normal  0.77864  n/a   
 
 
-
 
NC_008542  Bcen2424_1341  acyl-CoA dehydrogenase domain-containing protein  46.61 
 
 
609 aa  518  1.0000000000000001e-145  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_1233  acyl-CoA dehydrogenase domain-containing protein  47.19 
 
 
609 aa  517  1.0000000000000001e-145  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0860  acyl-CoA dehydrogenase-like  46.61 
 
 
609 aa  518  1.0000000000000001e-145  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1777  putative acyl-CoA dehydrogenase  46.39 
 
 
617 aa  513  1e-144  Methylibium petroleiphilum PM1  Bacteria  normal  0.130183  normal  0.0640101 
 
 
-
 
NC_014158  Tpau_0702  acyl-CoA dehydrogenase domain protein  44.83 
 
 
606 aa  498  1e-139  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1687  acyl-CoA dehydrogenase domain-containing protein  45.13 
 
 
642 aa  491  1e-137  Acidovorax sp. JS42  Bacteria  normal  normal  0.291033 
 
 
-
 
NC_010002  Daci_3315  acyl-CoA dehydrogenase domain-containing protein  46.62 
 
 
645 aa  489  1e-137  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00913148 
 
 
-
 
NC_011992  Dtpsy_2017  acyl-CoA dehydrogenase domain protein  45.69 
 
 
619 aa  490  1e-137  Acidovorax ebreus TPSY  Bacteria  normal  0.875107  n/a   
 
 
-
 
NC_012791  Vapar_2922  acyl-CoA dehydrogenase domain protein  45.37 
 
 
617 aa  488  1e-136  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2877  acyl-CoA dehydrogenase domain-containing protein  43.84 
 
 
652 aa  483  1e-135  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2570  acyl-CoA dehydrogenase-like  45.27 
 
 
627 aa  484  1e-135  Polaromonas sp. JS666  Bacteria  normal  0.215249  normal  0.667801 
 
 
-
 
NC_007908  Rfer_2384  acyl-CoA dehydrogenase-like  44.96 
 
 
618 aa  481  1e-134  Rhodoferax ferrireducens T118  Bacteria  normal  0.225519  n/a   
 
 
-
 
NC_013440  Hoch_4640  acyl-CoA dehydrogenase domain protein  44.25 
 
 
599 aa  480  1e-134  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1076  acyl-CoA dehydrogenase domain protein  42.88 
 
 
606 aa  452  1.0000000000000001e-126  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.276449 
 
 
-
 
NC_008699  Noca_1853  acyl-CoA dehydrogenase domain-containing protein  43.99 
 
 
608 aa  455  1.0000000000000001e-126  Nocardioides sp. JS614  Bacteria  normal  0.771828  n/a   
 
 
-
 
NC_008786  Veis_1790  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
563 aa  450  1e-125  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2164  acyl-CoA dehydrogenase domain-containing protein  38.37 
 
 
605 aa  412  1e-114  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000583422  n/a   
 
 
-
 
NC_009656  PSPA7_0607  putative acyl-CoA dehydrogenase  38.38 
 
 
598 aa  380  1e-104  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2366  acyl-CoA dehydrogenase domain-containing protein  36.9 
 
 
601 aa  380  1e-104  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000727045  n/a   
 
 
-
 
NC_008463  PA14_06620  putative acyl-CoA dehydrogenase  38.55 
 
 
598 aa  380  1e-104  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2211  Acyl-CoA dehydrogenase-like  36.24 
 
 
615 aa  376  1e-103  Geobacter metallireducens GS-15  Bacteria  normal  0.0172956  normal  0.0102784 
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  37.23 
 
 
595 aa  373  1e-102  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  37.23 
 
 
595 aa  373  1e-102  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  37.81 
 
 
595 aa  374  1e-102  Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  37.81 
 
 
595 aa  374  1e-102  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  37.81 
 
 
595 aa  374  1e-102  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  37.81 
 
 
595 aa  374  1e-102  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  37.23 
 
 
595 aa  373  1e-102  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  37.15 
 
 
595 aa  374  1e-102  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  37.29 
 
 
595 aa  372  1e-101  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  38.16 
 
 
595 aa  371  1e-101  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  37.32 
 
 
595 aa  371  1e-101  Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  37.32 
 
 
595 aa  371  1e-101  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1308  Acyl-CoA dehydrogenase  35.63 
 
 
596 aa  369  1e-101  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135322  n/a   
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  37.29 
 
 
595 aa  369  1e-101  Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  37.32 
 
 
595 aa  371  1e-101  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  37.67 
 
 
595 aa  367  1e-100  Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
NC_007298  Daro_1555  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  37.41 
 
 
597 aa  366  1e-100  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.000406482  normal  0.0195693 
 
 
-
 
NC_007510  Bcep18194_A6048  Acyl-CoA dehydrogenase-like  36.9 
 
 
599 aa  368  1e-100  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  36.82 
 
 
595 aa  368  1e-100  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4445  acyl-CoA dehydrogenase domain-containing protein  36.36 
 
 
626 aa  365  1e-99  Xanthobacter autotrophicus Py2  Bacteria  normal  0.744679  normal  0.0140421 
 
 
-
 
NC_007336  Reut_C6066  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  37.41 
 
 
598 aa  363  3e-99  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1177  acyl-CoA dehydrogenase family protein  35.49 
 
 
598 aa  363  4e-99  Colwellia psychrerythraea 34H  Bacteria  normal  0.158836  n/a   
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  35.62 
 
 
594 aa  363  4e-99  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_009092  Shew_2164  acyl-CoA dehydrogenase domain-containing protein  37.6 
 
 
596 aa  363  5.0000000000000005e-99  Shewanella loihica PV-4  Bacteria  normal  normal  0.764228 
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  37.14 
 
 
595 aa  363  5.0000000000000005e-99  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  35.69 
 
 
598 aa  362  8e-99  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_008044  TM1040_1557  acyl-CoA dehydrogenase-like  35.85 
 
 
593 aa  362  9e-99  Ruegeria sp. TM1040  Bacteria  normal  normal  0.538695 
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  35.91 
 
 
594 aa  362  1e-98  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010682  Rpic_0348  acyl-CoA dehydrogenase domain protein  36.02 
 
 
595 aa  361  2e-98  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1402  acyl-CoA dehydrogenase domain-containing protein  35.89 
 
 
619 aa  360  3e-98  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.55208 
 
 
-
 
NC_008740  Maqu_2750  acyl-CoA dehydrogenase domain-containing protein  37.34 
 
 
599 aa  360  4e-98  Marinobacter aquaeolei VT8  Bacteria  unclonable  0.000084613  n/a   
 
 
-
 
NC_009952  Dshi_0839  acyl-CoA dehydrogenase domain protein  37.02 
 
 
592 aa  359  6e-98  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.704355 
 
 
-
 
NC_012856  Rpic12D_0363  acyl-CoA dehydrogenase domain protein  35.86 
 
 
595 aa  359  8e-98  Ralstonia pickettii 12D  Bacteria  normal  0.84094  normal 
 
 
-
 
NC_008345  Sfri_2744  acyl-CoA dehydrogenase domain-containing protein  38.49 
 
 
596 aa  358  9.999999999999999e-98  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  36.36 
 
 
596 aa  357  1.9999999999999998e-97  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_009636  Smed_0146  acyl-CoA dehydrogenase domain-containing protein  36.52 
 
 
598 aa  356  5.999999999999999e-97  Sinorhizobium medicae WSM419  Bacteria  normal  0.986474  normal  0.238183 
 
 
-
 
NC_008345  Sfri_2039  acyl-CoA dehydrogenase domain-containing protein  36.2 
 
 
598 aa  355  1e-96  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_2868  acyl-CoA dehydrogenase domain-containing protein  35.85 
 
 
592 aa  355  2e-96  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.259312 
 
 
-
 
NC_004311  BRA0795  acyl-CoA dehydrogenase family protein  36.01 
 
 
597 aa  353  2.9999999999999997e-96  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0746  acyl-CoA dehydrogenase family protein  36.01 
 
 
597 aa  353  2.9999999999999997e-96  Brucella ovis ATCC 25840  Bacteria  normal  0.398029  n/a   
 
 
-
 
NC_009668  Oant_4033  acyl-CoA dehydrogenase domain-containing protein  35.85 
 
 
597 aa  354  2.9999999999999997e-96  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.795877  n/a   
 
 
-
 
NC_003910  CPS_4476  acyl-CoA dehydrogenase family protein  35.43 
 
 
602 aa  352  1e-95  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>