More than 300 homologs were found in PanDaTox collection
for query gene Patl_0068 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_0068  methyl-accepting chemotaxis sensory transducer  100 
 
 
648 aa  1301    Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  30.75 
 
 
679 aa  256  1.0000000000000001e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  29.1 
 
 
666 aa  225  2e-57  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_009656  PSPA7_5137  putative chemotaxis transducer  29.9 
 
 
673 aa  204  3e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  0.459514  n/a   
 
 
-
 
NC_008740  Maqu_0956  methyl-accepting chemotaxis sensory transducer  28.85 
 
 
676 aa  202  9.999999999999999e-51  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  34.95 
 
 
541 aa  201  3.9999999999999996e-50  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  38.82 
 
 
716 aa  198  2.0000000000000003e-49  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  35.41 
 
 
640 aa  198  3e-49  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  37.26 
 
 
642 aa  197  3e-49  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  37.78 
 
 
642 aa  197  6e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  35.61 
 
 
773 aa  196  1e-48  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  37.38 
 
 
572 aa  195  2e-48  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  36.28 
 
 
712 aa  192  1e-47  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  36.98 
 
 
568 aa  192  2e-47  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1011  methyl-accepting chemotaxis sensory transducer  34.25 
 
 
675 aa  191  4e-47  Shewanella woodyi ATCC 51908  Bacteria  normal  0.547128  hitchhiker  0.00024543 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  35.99 
 
 
712 aa  191  4e-47  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009901  Spea_0859  methyl-accepting chemotaxis sensory transducer  34.79 
 
 
673 aa  190  8e-47  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  34.03 
 
 
638 aa  189  1e-46  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_007520  Tcr_1999  methyl-accepting chemotaxis sensory transducer  33.07 
 
 
405 aa  189  2e-46  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  34.26 
 
 
674 aa  189  2e-46  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  35.53 
 
 
411 aa  186  1.0000000000000001e-45  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  34.68 
 
 
713 aa  186  1.0000000000000001e-45  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  33.98 
 
 
541 aa  186  1.0000000000000001e-45  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008463  PA14_58650  putative chemotaxis transducer  34.74 
 
 
673 aa  186  1.0000000000000001e-45  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  36.53 
 
 
638 aa  184  3e-45  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  36.53 
 
 
638 aa  184  4.0000000000000006e-45  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  33.51 
 
 
564 aa  184  6e-45  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  36.22 
 
 
638 aa  183  9.000000000000001e-45  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  34.97 
 
 
573 aa  183  9.000000000000001e-45  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  36.58 
 
 
619 aa  181  4e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  37.07 
 
 
633 aa  180  7e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  37.54 
 
 
573 aa  179  1e-43  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  33.43 
 
 
639 aa  179  2e-43  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  37.34 
 
 
638 aa  178  2e-43  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  34.75 
 
 
596 aa  178  2e-43  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_010501  PputW619_4403  methyl-accepting chemotaxis sensory transducer  32.5 
 
 
670 aa  178  3e-43  Pseudomonas putida W619  Bacteria  normal  0.604884  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  31.22 
 
 
640 aa  178  3e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_007954  Sden_2891  chemotaxis sensory transducer  33.81 
 
 
673 aa  178  3e-43  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2398  methyl-accepting chemotaxis sensory transducer  33.59 
 
 
656 aa  178  3e-43  Shewanella pealeana ATCC 700345  Bacteria  normal  0.201842  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  37.26 
 
 
647 aa  177  4e-43  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  36.83 
 
 
650 aa  177  4e-43  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  34.46 
 
 
555 aa  177  4e-43  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  33.14 
 
 
543 aa  177  5e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  31.81 
 
 
629 aa  177  5e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  37.7 
 
 
624 aa  177  5e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
662 aa  176  9.999999999999999e-43  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_007520  Tcr_0570  methyl-accepting chemotaxis sensory transducer  35.47 
 
 
674 aa  176  9.999999999999999e-43  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3809  methyl-accepting chemotaxis sensory transducer  34.81 
 
 
547 aa  176  1.9999999999999998e-42  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  34.3 
 
 
547 aa  175  2.9999999999999996e-42  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_008322  Shewmr7_3118  methyl-accepting chemotaxis sensory transducer  33.24 
 
 
673 aa  174  2.9999999999999996e-42  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  32.56 
 
 
568 aa  174  2.9999999999999996e-42  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3212  methyl-accepting chemotaxis sensory transducer  33.53 
 
 
673 aa  174  3.9999999999999995e-42  Shewanella sp. ANA-3  Bacteria  normal  0.990285  normal  0.659639 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  34.52 
 
 
640 aa  174  3.9999999999999995e-42  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  36.54 
 
 
637 aa  174  3.9999999999999995e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008321  Shewmr4_0902  methyl-accepting chemotaxis sensory transducer  33.24 
 
 
673 aa  174  3.9999999999999995e-42  Shewanella sp. MR-4  Bacteria  normal  normal  0.73728 
 
 
-
 
NC_009052  Sbal_0974  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
673 aa  174  5e-42  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1043  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
673 aa  174  5e-42  Shewanella baltica OS185  Bacteria  normal  0.530938  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
636 aa  174  5e-42  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009831  Ssed_0961  methyl-accepting chemotaxis sensory transducer  35.6 
 
 
675 aa  174  5e-42  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  29.09 
 
 
637 aa  174  5e-42  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009997  Sbal195_1076  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
673 aa  174  5e-42  Shewanella baltica OS195  Bacteria  normal  0.450868  normal 
 
 
-
 
NC_011663  Sbal223_3316  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
673 aa  174  5.999999999999999e-42  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0922  methyl-accepting chemotaxis sensory transducer  33.9 
 
 
572 aa  174  5.999999999999999e-42  Shewanella loihica PV-4  Bacteria  normal  normal  0.981358 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  36.39 
 
 
620 aa  173  7.999999999999999e-42  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  35.54 
 
 
621 aa  173  9e-42  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  35.28 
 
 
638 aa  172  1e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1539  histidine kinase, HAMP region: chemotaxis sensory transducer  36.71 
 
 
626 aa  172  1e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.206608  normal  0.0710897 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  32.87 
 
 
674 aa  172  1e-41  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  32.17 
 
 
540 aa  172  2e-41  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  37.07 
 
 
676 aa  172  2e-41  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  37.86 
 
 
681 aa  172  2e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  35.26 
 
 
640 aa  172  2e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  37.65 
 
 
634 aa  172  2e-41  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  34.38 
 
 
673 aa  172  2e-41  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  36.57 
 
 
438 aa  171  3e-41  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3985  methyl-accepting chemotaxis sensory transducer  37.34 
 
 
653 aa  171  4e-41  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  33.24 
 
 
541 aa  170  6e-41  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_007492  Pfl01_4022  chemotaxis sensory transducer  33.15 
 
 
493 aa  170  6e-41  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0986  methyl-accepting chemotaxis sensory transducer  35.6 
 
 
673 aa  170  7e-41  Shewanella putrefaciens CN-32  Bacteria  normal  0.603679  n/a   
 
 
-
 
NC_008345  Sfri_3082  methyl-accepting chemotaxis sensory transducer  34.38 
 
 
673 aa  170  7e-41  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  34.7 
 
 
545 aa  170  7e-41  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_010501  PputW619_0778  methyl-accepting chemotaxis sensory transducer  37.18 
 
 
639 aa  170  8e-41  Pseudomonas putida W619  Bacteria  normal  normal  0.66043 
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  32.04 
 
 
739 aa  169  1e-40  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  35.37 
 
 
541 aa  169  1e-40  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_008321  Shewmr4_3785  methyl-accepting chemotaxis sensory transducer  37.34 
 
 
653 aa  169  1e-40  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  39.22 
 
 
647 aa  169  1e-40  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4658  methyl-accepting chemotaxis sensory transducer  35.78 
 
 
639 aa  169  2e-40  Pseudomonas putida KT2440  Bacteria  normal  0.415489  normal 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  34.51 
 
 
546 aa  169  2e-40  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  35.78 
 
 
639 aa  169  2e-40  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
NC_010506  Swoo_3605  methyl-accepting chemotaxis sensory transducer  34.85 
 
 
666 aa  168  2e-40  Shewanella woodyi ATCC 51908  Bacteria  normal  0.644417  normal 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  32.04 
 
 
647 aa  168  2.9999999999999998e-40  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  36.22 
 
 
646 aa  168  2.9999999999999998e-40  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_008322  Shewmr7_3858  methyl-accepting chemotaxis sensory transducer  37.03 
 
 
653 aa  168  2.9999999999999998e-40  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  34.57 
 
 
541 aa  167  4e-40  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  30.42 
 
 
541 aa  167  5e-40  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_010322  PputGB1_4653  methyl-accepting chemotaxis sensory transducer  35.78 
 
 
639 aa  167  5e-40  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
658 aa  167  5.9999999999999996e-40  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0379  histidine kinase, HAMP region: chemotaxis sensory transducer  34.83 
 
 
647 aa  167  6.9999999999999995e-40  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.454626  normal 
 
 
-
 
NC_004347  SO_3642  methyl-accepting chemotaxis protein  34.37 
 
 
673 aa  167  8e-40  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  34.42 
 
 
552 aa  167  8e-40  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
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