More than 300 homologs were found in PanDaTox collection
for query gene Paes_2113 on replicon NC_011059
Organism: Prosthecochloris aestuarii DSM 271



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  100 
 
 
371 aa  775  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  9.82338e-10  normal  0.988223 
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  77.45 
 
 
369 aa  608  1e-173  Chlorobium limicola DSM 245  Bacteria  hitchhiker  4.01664e-05  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  77.75 
 
 
366 aa  607  1e-172  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  73.37 
 
 
369 aa  590  1e-167  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  72.55 
 
 
369 aa  583  1e-165  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  73.7 
 
 
367 aa  578  1e-164  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  67.57 
 
 
367 aa  543  1e-153  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  54.64 
 
 
374 aa  412  1e-114  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  52.88 
 
 
383 aa  408  1e-113  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  2.77554e-07  n/a   
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  54.64 
 
 
374 aa  411  1e-113  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  53.85 
 
 
374 aa  408  1e-113  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  53.05 
 
 
374 aa  406  1e-112  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  52.38 
 
 
376 aa  405  1e-112  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  53.05 
 
 
373 aa  402  1e-111  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  51.44 
 
 
386 aa  402  1e-111  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  51.18 
 
 
386 aa  399  1e-110  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  53.19 
 
 
359 aa  399  1e-110  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  1.04913e-05  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  53.87 
 
 
373 aa  395  1e-109  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  53.05 
 
 
373 aa  397  1e-109  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2002  carbamoyl-phosphate synthase, small subunit  51.52 
 
 
379 aa  393  1e-108  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  52.38 
 
 
374 aa  393  1e-108  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  51.46 
 
 
440 aa  394  1e-108  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  53.85 
 
 
373 aa  393  1e-108  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0778  carbamoyl-phosphate synthase small subunit  51.18 
 
 
376 aa  393  1e-108  Methylobacillus flagellatus KT  Bacteria  normal  0.42563  hitchhiker  0.000147727 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  50 
 
 
381 aa  390  1e-107  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  49.47 
 
 
376 aa  390  1e-107  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2392  carbamoyl-phosphate synthase small subunit  50.39 
 
 
390 aa  389  1e-107  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1456  carbamoyl-phosphate synthase, small subunit  50.39 
 
 
390 aa  389  1e-107  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A0072  carbamoyl phosphate synthase small subunit  50.66 
 
 
382 aa  388  1e-107  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.399436  normal  0.955538 
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  50.66 
 
 
391 aa  388  1e-107  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_2615  carbamoyl phosphate synthase small subunit  50.13 
 
 
389 aa  385  1e-106  Variovorax paradoxus S110  Bacteria  normal  0.218889  n/a   
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  50.39 
 
 
397 aa  385  1e-106  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A0074  carbamoyl phosphate synthase small subunit  50.13 
 
 
382 aa  385  1e-106  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  51.19 
 
 
380 aa  386  1e-106  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal 
 
 
-
 
NC_011149  SeAg_B0073  carbamoyl phosphate synthase small subunit  50.39 
 
 
382 aa  386  1e-106  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0591  carbamoyl phosphate synthase small subunit  50 
 
 
382 aa  387  1e-106  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A0070  carbamoyl phosphate synthase small subunit  50.39 
 
 
382 aa  387  1e-106  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  51.46 
 
 
381 aa  384  1e-105  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_010531  Pnec_0848  carbamoyl-phosphate synthase, small subunit  50 
 
 
398 aa  384  1e-105  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.287672 
 
 
-
 
NC_010524  Lcho_2823  carbamoyl-phosphate synthase, small subunit  50.77 
 
 
394 aa  383  1e-105  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010682  Rpic_2036  carbamoyl phosphate synthase small subunit  50.66 
 
 
378 aa  381  1e-105  Ralstonia pickettii 12J  Bacteria  normal  0.534876  normal 
 
 
-
 
NC_013889  TK90_0698  carbamoyl-phosphate synthase, small subunit  48.81 
 
 
377 aa  384  1e-105  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.110228 
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  50.66 
 
 
381 aa  381  1e-105  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  50.93 
 
 
393 aa  382  1e-105  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_008752  Aave_2610  carbamoyl-phosphate synthase, small subunit  49.61 
 
 
392 aa  382  1e-105  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.752092 
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  48.71 
 
 
393 aa  381  1e-104  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  50.66 
 
 
381 aa  381  1e-104  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  50.66 
 
 
381 aa  381  1e-104  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_008542  Bcen2424_1290  carbamoyl phosphate synthase small subunit  50.66 
 
 
380 aa  379  1e-104  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0948613  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  50.66 
 
 
381 aa  380  1e-104  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  50.66 
 
 
381 aa  381  1e-104  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0809  carbamoyl phosphate synthase small subunit  50.66 
 
 
380 aa  379  1e-104  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  48.95 
 
 
387 aa  379  1e-104  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_010498  EcSMS35_0032  carbamoyl phosphate synthase small subunit  49.21 
 
 
391 aa  378  1e-104  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  51.44 
 
 
385 aa  378  1e-104  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  50.4 
 
 
381 aa  381  1e-104  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  52.82 
 
 
391 aa  381  1e-104  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  50.66 
 
 
381 aa  381  1e-104  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  49.03 
 
 
361 aa  380  1e-104  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1728  carbamoyl phosphate synthase small subunit  50.93 
 
 
378 aa  381  1e-104  Ralstonia pickettii 12D  Bacteria  normal  0.590257  normal  0.961099 
 
 
-
 
NC_007520  Tcr_0878  carbamoyl-phosphate synthase, small subunit  52.65 
 
 
378 aa  379  1e-104  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1519  carbamoyl phosphate synthase small subunit  50.13 
 
 
378 aa  380  1e-104  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1261  carbamoyl phosphate synthase small subunit  50.92 
 
 
380 aa  381  1e-104  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0131767  normal  0.191599 
 
 
-
 
NC_013421  Pecwa_3841  carbamoyl phosphate synthase small subunit  50.4 
 
 
382 aa  375  1e-103  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  50.13 
 
 
382 aa  378  1e-103  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_011126  HY04AAS1_0951  carbamoyl-phosphate synthase, small subunit  51.12 
 
 
352 aa  375  1e-103  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  1.13034e-09  n/a   
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  49.87 
 
 
373 aa  375  1e-103  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_011353  ECH74115_0035  carbamoyl phosphate synthase small subunit  48.95 
 
 
382 aa  377  1e-103  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_00035  hypothetical protein  48.95 
 
 
382 aa  377  1e-103  Escherichia coli BL21  Bacteria  normal  0.457385  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  50.4 
 
 
373 aa  377  1e-103  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2868  carbamoyl phosphate synthase small subunit  51.46 
 
 
384 aa  376  1e-103  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00228162  normal 
 
 
-
 
NC_010468  EcolC_3623  carbamoyl phosphate synthase small subunit  48.95 
 
 
382 aa  375  1e-103  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.314254 
 
 
-
 
NC_010658  SbBS512_E0036  carbamoyl phosphate synthase small subunit  48.95 
 
 
382 aa  377  1e-103  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1431  carbamoyl phosphate synthase small subunit  50.27 
 
 
382 aa  377  1e-103  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2030  carbamoyl phosphate synthase small subunit  51.19 
 
 
380 aa  376  1e-103  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.115427  normal 
 
 
-
 
NC_010002  Daci_4932  carbamoyl-phosphate synthase, small subunit  49.74 
 
 
388 aa  377  1e-103  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.259128 
 
 
-
 
NC_009801  EcE24377A_0033  carbamoyl phosphate synthase small subunit  48.95 
 
 
382 aa  377  1e-103  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0035  carbamoyl phosphate synthase small subunit  48.95 
 
 
382 aa  377  1e-103  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1371  carbamoyl phosphate synthase small subunit  50.27 
 
 
402 aa  376  1e-103  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1179  carbamoyl phosphate synthase small subunit  50.92 
 
 
381 aa  377  1e-103  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.381236 
 
 
-
 
NC_009654  Mmwyl1_4035  carbamoyl phosphate synthase small subunit  49.73 
 
 
396 aa  375  1e-103  Marinomonas sp. MWYL1  Bacteria  normal  0.311643  normal 
 
 
-
 
NC_010622  Bphy_0873  carbamoyl phosphate synthase small subunit  51.46 
 
 
384 aa  376  1e-103  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal  0.264285 
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  50.27 
 
 
372 aa  378  1e-103  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_00036  carbamoyl-phosphate synthase small subunit  48.95 
 
 
382 aa  377  1e-103  Escherichia coli BL21(DE3)  Bacteria  normal  0.53844  n/a   
 
 
-
 
NC_008390  Bamb_1167  carbamoyl phosphate synthase small subunit  50.92 
 
 
380 aa  377  1e-103  Burkholderia ambifaria AMMD  Bacteria  normal  0.278191  n/a   
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  51.05 
 
 
384 aa  375  1e-103  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_007951  Bxe_A1256  carbamoyl phosphate synthase small subunit  50.93 
 
 
391 aa  375  1e-103  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_62930  carbamoyl phosphate synthase small subunit  48.95 
 
 
378 aa  375  1e-103  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1853  carbamoyl phosphate synthase small subunit  48.28 
 
 
378 aa  377  1e-103  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0936768  n/a   
 
 
-
 
NC_007948  Bpro_2679  carbamoyl phosphate synthase small subunit  48.33 
 
 
401 aa  377  1e-103  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  48.93 
 
 
385 aa  377  1e-103  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  50.4 
 
 
373 aa  376  1e-103  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
CP001637  EcDH1_3567  carbamoyl-phosphate synthase, small subunit  48.95 
 
 
382 aa  377  1e-103  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2177  carbamoyl phosphate synthase small subunit  50.53 
 
 
378 aa  374  1e-102  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1127  carbamoyl-phosphate synthase small subunit  51.88 
 
 
379 aa  372  1e-102  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.390679  normal 
 
 
-
 
NC_002947  PP_4724  carbamoyl phosphate synthase small subunit  49.74 
 
 
378 aa  371  1e-102  Pseudomonas putida KT2440  Bacteria  normal  0.103863  hitchhiker  0.00276318 
 
 
-
 
NC_008825  Mpe_A1261  carbamoyl-phosphate synthase small subunit  50.13 
 
 
383 aa  372  1e-102  Methylibium petroleiphilum PM1  Bacteria  normal  decreased coverage  0.00672288 
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  50 
 
 
359 aa  374  1e-102  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_009512  Pput_4590  carbamoyl phosphate synthase small subunit  49.74 
 
 
386 aa  371  1e-102  Pseudomonas putida F1  Bacteria  normal  normal  0.740896 
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  50.28 
 
 
359 aa  374  1e-102  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
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