More than 300 homologs were found in PanDaTox collection
for query gene PXO_00054 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  100 
 
 
797 aa  1604    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  62.18 
 
 
775 aa  651    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  65.92 
 
 
793 aa  993    Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  43.47 
 
 
752 aa  514  1e-144  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  53.11 
 
 
733 aa  508  9.999999999999999e-143  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  68.24 
 
 
755 aa  496  1e-139  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  51.52 
 
 
705 aa  491  1e-137  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  51.15 
 
 
753 aa  486  1e-136  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  44.69 
 
 
792 aa  485  1e-135  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  45.93 
 
 
945 aa  485  1e-135  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  68.92 
 
 
740 aa  483  1e-135  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  43.33 
 
 
745 aa  483  1e-135  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  53.55 
 
 
679 aa  461  9.999999999999999e-129  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  53.93 
 
 
679 aa  449  1.0000000000000001e-124  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  48.43 
 
 
656 aa  440  9.999999999999999e-123  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  48.9 
 
 
657 aa  440  9.999999999999999e-123  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  48.09 
 
 
664 aa  436  1e-121  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.51 
 
 
665 aa  437  1e-121  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  48.71 
 
 
664 aa  438  1e-121  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  48.25 
 
 
656 aa  438  1e-121  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  47.32 
 
 
657 aa  436  1e-121  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  82.86 
 
 
691 aa  434  1e-120  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  46.62 
 
 
767 aa  432  1e-119  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  48.66 
 
 
654 aa  429  1e-118  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  69.12 
 
 
706 aa  423  1e-117  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  44.94 
 
 
863 aa  419  9.999999999999999e-116  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  45.15 
 
 
860 aa  419  9.999999999999999e-116  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.94 
 
 
1123 aa  414  1e-114  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.93 
 
 
701 aa  414  1e-114  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  70.5 
 
 
843 aa  412  1e-114  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  46.3 
 
 
793 aa  409  1.0000000000000001e-112  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  46.73 
 
 
779 aa  404  1e-111  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.44 
 
 
864 aa  397  1e-109  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.32 
 
 
845 aa  398  1e-109  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.522396 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  42.19 
 
 
678 aa  386  1e-105  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  45.84 
 
 
1029 aa  368  1e-100  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  62.75 
 
 
572 aa  356  1e-96  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  63.95 
 
 
559 aa  351  3e-95  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  65.12 
 
 
559 aa  350  4e-95  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  43.2 
 
 
707 aa  350  5e-95  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  38.42 
 
 
610 aa  347  6e-94  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  59.77 
 
 
569 aa  345  2e-93  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  65.62 
 
 
586 aa  344  4e-93  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  63.12 
 
 
583 aa  344  4e-93  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  63.16 
 
 
559 aa  343  5e-93  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  68.12 
 
 
579 aa  343  8e-93  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.54 
 
 
888 aa  338  1.9999999999999998e-91  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  55.68 
 
 
579 aa  335  2e-90  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  67.77 
 
 
577 aa  335  2e-90  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  56.91 
 
 
578 aa  335  3e-90  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  55.26 
 
 
598 aa  335  3e-90  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  60.06 
 
 
566 aa  333  5e-90  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  58.31 
 
 
557 aa  333  7.000000000000001e-90  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  58.31 
 
 
557 aa  333  7.000000000000001e-90  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  68.36 
 
 
592 aa  333  7.000000000000001e-90  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  56.16 
 
 
584 aa  333  7.000000000000001e-90  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  58.31 
 
 
557 aa  333  1e-89  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  54.4 
 
 
596 aa  331  3e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  55.16 
 
 
589 aa  331  3e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  75.78 
 
 
680 aa  331  4e-89  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  62.94 
 
 
542 aa  330  8e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  60.71 
 
 
527 aa  329  1.0000000000000001e-88  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  61.69 
 
 
580 aa  329  1.0000000000000001e-88  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  60.46 
 
 
562 aa  328  2.0000000000000001e-88  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.52 
 
 
566 aa  328  2.0000000000000001e-88  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  67.84 
 
 
608 aa  327  5e-88  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  65.26 
 
 
601 aa  327  6e-88  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  67.49 
 
 
617 aa  327  7e-88  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  67.84 
 
 
609 aa  327  7e-88  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  56.47 
 
 
575 aa  326  1e-87  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  57.19 
 
 
580 aa  325  3e-87  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  63.54 
 
 
557 aa  324  4e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  61.41 
 
 
552 aa  324  5e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  57.45 
 
 
579 aa  323  6e-87  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  65 
 
 
584 aa  323  7e-87  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  59.67 
 
 
653 aa  323  9.000000000000001e-87  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  54.42 
 
 
586 aa  323  9.000000000000001e-87  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  59.67 
 
 
653 aa  322  9.999999999999999e-87  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  59.38 
 
 
433 aa  322  1.9999999999999998e-86  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  51.5 
 
 
589 aa  322  1.9999999999999998e-86  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  52.33 
 
 
567 aa  321  3e-86  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  62.62 
 
 
618 aa  321  3.9999999999999996e-86  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  58.84 
 
 
591 aa  320  5e-86  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  63.42 
 
 
589 aa  320  6e-86  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  64.42 
 
 
621 aa  320  7.999999999999999e-86  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  58.84 
 
 
585 aa  319  1e-85  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  60.13 
 
 
602 aa  319  1e-85  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_012880  Dd703_2108  methyl-accepting chemotaxis sensory transducer  52.27 
 
 
556 aa  319  1e-85  Dickeya dadantii Ech703  Bacteria  normal  0.0190315  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  70.54 
 
 
585 aa  318  2e-85  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  56.82 
 
 
630 aa  318  3e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2145  methyl-accepting chemotaxis protein  55.41 
 
 
781 aa  318  3e-85  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.297887  normal 
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  54.57 
 
 
594 aa  318  3e-85  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  67.45 
 
 
539 aa  318  3e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  65.36 
 
 
650 aa  317  5e-85  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  64.79 
 
 
618 aa  317  6e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  58.05 
 
 
561 aa  317  7e-85  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  59.59 
 
 
515 aa  317  8e-85  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  60.34 
 
 
578 aa  317  8e-85  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  57.81 
 
 
628 aa  316  9e-85  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  65.49 
 
 
573 aa  316  9.999999999999999e-85  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
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