11 homologs were found in PanDaTox collection
for query gene PSPTO_4272 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_4272  hypothetical protein  100 
 
 
494 aa  1011  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0626  hypothetical protein  56.45 
 
 
496 aa  563  1e-159  Shewanella sp. ANA-3  Bacteria  normal  normal  0.339165 
 
 
-
 
NC_009997  Sbal195_1557  hypothetical protein  34.44 
 
 
377 aa  193  6e-48  Shewanella baltica OS195  Bacteria  normal  0.71793  normal  0.744672 
 
 
-
 
NC_009720  Xaut_2247  hypothetical protein  26.55 
 
 
351 aa  62.4  2e-08  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0221493  normal  0.0124009 
 
 
-
 
NC_009432  Rsph17025_4364  hypothetical protein  23.64 
 
 
484 aa  54.7  3e-06  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.945805  normal 
 
 
-
 
NC_008146  Mmcs_0025  hypothetical protein  24.54 
 
 
603 aa  49.3  0.0002  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0033  hypothetical protein  24.54 
 
 
603 aa  49.3  0.0002  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0288691 
 
 
-
 
NC_010501  PputW619_3361  hypothetical protein  24.74 
 
 
482 aa  48.5  0.0002  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0867  hypothetical protein  23.22 
 
 
451 aa  47.4  0.0005  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.886139  n/a   
 
 
-
 
NC_009077  Mjls_0855  hypothetical protein  25.99 
 
 
511 aa  47  0.0007  Mycobacterium sp. JLS  Bacteria  normal  0.823491  normal 
 
 
-
 
NC_010552  BamMC406_4438  hypothetical protein  23.96 
 
 
476 aa  45.4  0.003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.35414  normal  0.628211 
 
 
-
 
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