6 homologs were found in PanDaTox collection
for query gene PSPTO_0007 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_0007  hypothetical protein  100 
 
 
294 aa  609  1e-173  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3165  hypothetical protein  50.53 
 
 
293 aa  270  2.9999999999999997e-71  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0994  hypothetical protein  47.59 
 
 
286 aa  246  4e-64  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3537  exonuclease, RNase T and DNA polymerase III  33.82 
 
 
286 aa  146  5e-34  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2692  hypothetical protein  53.42 
 
 
89 aa  87.8  2e-16  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.673423 
 
 
-
 
NC_008786  Veis_2695  hypothetical protein  39.24 
 
 
85 aa  66.6  0.0000000005  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.384073 
 
 
-
 
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