12 homologs were found in PanDaTox collection
for query gene PSPTOA0044 on replicon NC_004633
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004632  PSPTO_B0051  traI protein  100 
 
 		 266 aa  543  1e-153  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_004633  PSPTOA0044  relaxase  100 
 
 		 266 aa  543  1e-153  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_011081  SeHA_A0102  lipoprotein  55.68 
 
 		 272 aa  281  6.000000000000001e-75  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.191153  normal  1 
 
 
-
 
NC_010117  COXBURSA331_A1832  DotC protein  35.71 
 
 		 274 aa  155  5.0000000000000005e-37  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009727  CBUD_0351  DotC  35.71 
 
 		 274 aa  155  7e-37  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  1  n/a   
 
 
-
 
NC_006368  lpp2729  defect in organelle trafficking lipoprotein DotC  27.78 
 
 		 303 aa  107  2e-22  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2602  defect in organelle trafficking lipoprotein DotC  27.78 
 
 		 303 aa  107  2e-22  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010580  Bind_3678  DotC  29.07 
 
 		 321 aa  105  6e-22  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.165494 
 
 
-
 
NC_009705  YpsIP31758_B0111  putative type IV secretion system protein DotC  28.78 
 
 		 282 aa  101  1e-20  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.200917  n/a   
 
 
-
 
NC_009468  Acry_3447  hypothetical protein  32 
 
 		 313 aa  93.2  4e-18  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_008738  Maqu_4280  hypothetical protein  27.5 
 
 		 296 aa  72  0.000000000009  Marinobacter aquaeolei VT8  Bacteria  n/a    n/a   
 
 
-
 
NC_011758  Mchl_5602  hypothetical protein  26.29 
 
 		 384 aa  58.9  0.00000008  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.3238  normal  0.0253626 
 
 
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