More than 300 homologs were found in PanDaTox collection
for query gene PP_4521 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_4521  aerotaxis receptor, putative  100 
 
 
521 aa  1060    Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  96.55 
 
 
521 aa  1025    Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  69.29 
 
 
521 aa  725    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3735  PAS  68.33 
 
 
521 aa  713    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  98.66 
 
 
534 aa  1044    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  92.13 
 
 
521 aa  978    Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  70.34 
 
 
521 aa  725    Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  50.19 
 
 
521 aa  492  9.999999999999999e-139  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  48.98 
 
 
521 aa  493  9.999999999999999e-139  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  49.62 
 
 
521 aa  487  1e-136  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  49.62 
 
 
521 aa  488  1e-136  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  50 
 
 
521 aa  486  1e-136  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.81 
 
 
521 aa  484  1e-135  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_007005  Psyr_3406  PAS  50.09 
 
 
521 aa  481  1e-134  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.25 
 
 
521 aa  480  1e-134  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  48.37 
 
 
522 aa  474  1e-132  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  49.53 
 
 
521 aa  473  1e-132  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  49.25 
 
 
521 aa  473  1e-132  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.63 
 
 
521 aa  471  1.0000000000000001e-131  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  51.49 
 
 
521 aa  465  9.999999999999999e-131  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  51.12 
 
 
521 aa  464  1e-129  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  47.59 
 
 
524 aa  446  1.0000000000000001e-124  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  43.35 
 
 
515 aa  429  1e-119  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.94 
 
 
527 aa  409  1e-113  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.15 
 
 
523 aa  390  1e-107  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  42.15 
 
 
527 aa  384  1e-105  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  47.78 
 
 
419 aa  380  1e-104  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  39.59 
 
 
518 aa  359  7e-98  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.07 
 
 
524 aa  353  2.9999999999999997e-96  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.57 
 
 
521 aa  345  1e-93  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  41.9 
 
 
531 aa  343  4e-93  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.88 
 
 
524 aa  343  5.999999999999999e-93  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.06 
 
 
526 aa  341  2e-92  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.68 
 
 
524 aa  341  2e-92  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_009438  Sputcn32_3294  methyl-accepting chemotaxis sensory transducer  39.76 
 
 
524 aa  340  5e-92  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  41.43 
 
 
529 aa  338  9.999999999999999e-92  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.88 
 
 
524 aa  338  1.9999999999999998e-91  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  38.59 
 
 
524 aa  333  3e-90  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  38.59 
 
 
524 aa  333  5e-90  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.59 
 
 
524 aa  333  5e-90  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  38.26 
 
 
524 aa  332  1e-89  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  35.58 
 
 
520 aa  331  2e-89  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  36.6 
 
 
524 aa  328  1.0000000000000001e-88  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  37.6 
 
 
524 aa  327  2.0000000000000001e-88  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2159  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.36 
 
 
523 aa  323  5e-87  Shewanella loihica PV-4  Bacteria  normal  0.416992  normal  0.881373 
 
 
-
 
NC_003910  CPS_1621  methyl-accepting chemotaxis protein  36.11 
 
 
513 aa  305  2.0000000000000002e-81  Colwellia psychrerythraea 34H  Bacteria  normal  0.113175  n/a   
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  37.18 
 
 
522 aa  303  5.000000000000001e-81  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.72 
 
 
522 aa  303  6.000000000000001e-81  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  36.98 
 
 
522 aa  301  1e-80  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  36.78 
 
 
522 aa  298  2e-79  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  36.2 
 
 
522 aa  295  1e-78  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  36.5 
 
 
538 aa  295  1e-78  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  34.75 
 
 
518 aa  292  8e-78  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.69 
 
 
516 aa  292  8e-78  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  37.5 
 
 
516 aa  291  1e-77  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  37.29 
 
 
532 aa  291  1e-77  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.33 
 
 
522 aa  290  5.0000000000000004e-77  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  37.76 
 
 
517 aa  286  4e-76  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.13 
 
 
522 aa  285  1.0000000000000001e-75  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.13 
 
 
522 aa  285  2.0000000000000002e-75  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  33.21 
 
 
511 aa  282  1e-74  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  35.87 
 
 
532 aa  282  1e-74  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_010524  Lcho_1294  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.21 
 
 
575 aa  281  3e-74  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00873235 
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.8 
 
 
556 aa  280  7e-74  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  36.49 
 
 
520 aa  275  1.0000000000000001e-72  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008752  Aave_2113  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.2 
 
 
550 aa  275  2.0000000000000002e-72  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0337  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.76 
 
 
517 aa  273  5.000000000000001e-72  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2984  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  36.02 
 
 
565 aa  272  9e-72  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  34.55 
 
 
583 aa  271  1e-71  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5286  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.93 
 
 
519 aa  271  2e-71  Delftia acidovorans SPH-1  Bacteria  normal  0.982796  normal 
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  36.52 
 
 
523 aa  271  2.9999999999999997e-71  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.44 
 
 
522 aa  270  5.9999999999999995e-71  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.24 
 
 
522 aa  269  7e-71  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.24 
 
 
522 aa  269  7e-71  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1520  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.48 
 
 
543 aa  269  1e-70  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.112151 
 
 
-
 
NC_003296  RSp1224  aerotaxis sensor receptor transmembrane protein  35.65 
 
 
514 aa  266  5e-70  Ralstonia solanacearum GMI1000  Bacteria  normal  0.229455  normal  0.54431 
 
 
-
 
NC_008825  Mpe_A2920  aerotaxis sensor receptor  36.33 
 
 
549 aa  266  7e-70  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.41 
 
 
551 aa  265  2e-69  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_011992  Dtpsy_2648  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.04 
 
 
520 aa  263  4.999999999999999e-69  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2845  methyl-accepting chemotaxis protein  34.94 
 
 
526 aa  261  2e-68  Yersinia pestis Angola  Bacteria  normal  normal  0.208852 
 
 
-
 
NC_009080  BMA10247_2473  methyl-accepting chemotaxis protein  33.27 
 
 
580 aa  261  2e-68  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0264  methyl-accepting chemotaxis protein  33.27 
 
 
580 aa  261  2e-68  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1726  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.94 
 
 
526 aa  261  2e-68  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2406  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.29 
 
 
566 aa  261  2e-68  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6942  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.15 
 
 
566 aa  261  2e-68  Burkholderia phytofirmans PsJN  Bacteria  normal  0.819674  normal 
 
 
-
 
NC_008785  BMASAVP1_A2685  methyl-accepting chemotaxis protein  33.27 
 
 
580 aa  261  2e-68  Burkholderia mallei SAVP1  Bacteria  normal  0.394636  n/a   
 
 
-
 
NC_007951  Bxe_A2405  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  33.51 
 
 
514 aa  261  2e-68  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000957151  normal  0.313744 
 
 
-
 
NC_008836  BMA10229_A2390  methyl-accepting chemotaxis protein  33.27 
 
 
580 aa  261  2e-68  Burkholderia mallei NCTC 10229  Bacteria  normal  0.790589  n/a   
 
 
-
 
NC_009708  YpsIP31758_1618  methyl-accepting chemotaxis protein  34.94 
 
 
526 aa  261  3e-68  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.19 
 
 
598 aa  261  3e-68  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.73 
 
 
514 aa  260  5.0000000000000005e-68  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0674  PAS  35.03 
 
 
544 aa  259  6e-68  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0927  methyl-accepting chemotaxis protein  33.64 
 
 
623 aa  259  1e-67  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0760  aerotaxis sensor receptor  33.64 
 
 
583 aa  259  1e-67  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0749  aerotaxis sensor receptor  33.64 
 
 
669 aa  258  2e-67  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  35.36 
 
 
532 aa  257  3e-67  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0268  methyl-accepting chemotaxis sensory transducer  33.83 
 
 
514 aa  258  3e-67  Burkholderia sp. 383  Bacteria  normal  normal  0.723346 
 
 
-
 
NC_010002  Daci_2372  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.3 
 
 
579 aa  257  4e-67  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.79 
 
 
524 aa  254  2.0000000000000002e-66  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3295  methyl-accepting chemotaxis sensory transducer  34.59 
 
 
519 aa  255  2.0000000000000002e-66  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
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