10 homologs were found in PanDaTox collection
for query gene PP_3619 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_3619  hypothetical protein  100 
 
 
298 aa  622  1e-177  Pseudomonas putida KT2440  Bacteria  decreased coverage  0.00105207  normal 
 
 
-
 
NC_009512  Pput_2114  hypothetical protein  73.29 
 
 
292 aa  462  1e-129  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2611  hypothetical protein  73.54 
 
 
319 aa  459  1e-128  Pseudomonas putida KT2440  Bacteria  normal  0.0183477  normal  0.0388843 
 
 
-
 
NC_002947  PP_3618  hypothetical protein  70.93 
 
 
297 aa  446  1e-124  Pseudomonas putida KT2440  Bacteria  decreased coverage  0.00152122  normal 
 
 
-
 
NC_009512  Pput_3114  hypothetical protein  69.07 
 
 
297 aa  435  1e-121  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3617  hypothetical protein  70.69 
 
 
298 aa  433  1e-120  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.00595661  normal 
 
 
-
 
NC_010322  PputGB1_2298  hypothetical protein  70.21 
 
 
296 aa  434  1e-120  Pseudomonas putida GB-1  Bacteria  normal  normal  0.800461 
 
 
-
 
NC_010322  PputGB1_3237  hypothetical protein  69.18 
 
 
296 aa  424  1e-118  Pseudomonas putida GB-1  Bacteria  normal  0.141519  normal 
 
 
-
 
NC_003296  RS01955  hypothetical protein  25.98 
 
 
368 aa  45.1  0.001  Ralstonia solanacearum GMI1000  Bacteria  normal  0.409206  normal 
 
 
-
 
NC_012791  Vapar_3864  hypothetical protein  32.08 
 
 
372 aa  42.4  0.009  Variovorax paradoxus S110  Bacteria  normal  0.548972  n/a   
 
 
-
 
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