8 homologs were found in PanDaTox collection
for query gene PP_1551 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_1551  phage replication protein O, putative  100 
 
 
284 aa  588  1e-167  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  3.36071e-05 
 
 
-
 
NC_009512  Pput_4130  phage replication protein O  91.23 
 
 
285 aa  539  1e-152  Pseudomonas putida F1  Bacteria  normal  0.763522  normal  0.367122 
 
 
-
 
NC_002947  PP_3894  phage replication protein O, putative  33.62 
 
 
276 aa  75.1  1e-12  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00393455 
 
 
-
 
NC_010501  PputW619_1318  hypothetical protein  29.85 
 
 
255 aa  67.4  3e-10  Pseudomonas putida W619  Bacteria  normal  0.246205  normal 
 
 
-
 
NC_010322  PputGB1_3439  putative transcriptional regulator  33.33 
 
 
249 aa  56.6  4e-07  Pseudomonas putida GB-1  Bacteria  hitchhiker  1.19584e-08  unclonable  9.09525e-17 
 
 
-
 
NC_011083  SeHA_C1119  replication protein O  30.1 
 
 
301 aa  54.7  2e-06  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.676639  normal  0.807311 
 
 
-
 
NC_007954  Sden_3263  hypothetical protein  24.29 
 
 
294 aa  43.9  0.003  Shewanella denitrificans OS217  Bacteria  normal  0.102407  n/a   
 
 
-
 
NC_013162  Coch_0881  hypothetical protein  27.27 
 
 
298 aa  43.1  0.006  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.999  n/a   
 
 
-
 
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