9 homologs were found in PanDaTox collection
for query gene PP_1498 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_1498  putative lipoprotein  100 
 
 
182 aa  369  1e-101  Pseudomonas putida KT2440  Bacteria  decreased coverage  0.00314767  normal 
 
 
-
 
NC_009512  Pput_4224  hypothetical protein  97.8 
 
 
182 aa  342  1e-93  Pseudomonas putida F1  Bacteria  normal  0.98466  normal 
 
 
-
 
NC_010322  PputGB1_1103  lipoprotein  96.7 
 
 
182 aa  340  7e-93  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4119  lipoprotein  94.51 
 
 
182 aa  334  5e-91  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1062  putative lipoprotein  60.33 
 
 
184 aa  231  4e-60  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.215998 
 
 
-
 
NC_009656  PSPA7_1440  putative lipoprotein  56.28 
 
 
183 aa  205  3e-52  Pseudomonas aeruginosa PA7  Bacteria  normal  0.681326  n/a   
 
 
-
 
NC_008463  PA14_16560  putative lipoprotein  55.74 
 
 
183 aa  203  1e-51  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3368  hypothetical protein  53.76 
 
 
183 aa  201  4e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.0179513  normal 
 
 
-
 
NC_012560  Avin_39370  hypothetical protein  49.18 
 
 
180 aa  153  1e-36  Azotobacter vinelandii DJ  Bacteria  normal  0.154997  n/a   
 
 
-
 
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