6 homologs were found in PanDaTox collection
for query gene PHATRDRAFT_40578 on replicon NC_011692
Organism: Phaeodactylum tricornutum CCAP 1055/1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011692  PHATRDRAFT_40578  predicted protein  100 
 
 
860 aa  1776    Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_011681  PHATRDRAFT_37731  predicted protein  51.9 
 
 
1373 aa  101  5e-20  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
BN001302  ANIA_03923  ubiquitin-protein ligase E3 component (UBR1), putative (AFU_orthologue; AFUA_6G08420)  35.85 
 
 
2159 aa  80.5  0.0000000000001  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.362385  normal  0.693019 
 
 
-
 
NC_009068  PICST_64920  predicted protein  33.99 
 
 
1802 aa  80.5  0.0000000000001  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.904331 
 
 
-
 
NC_009068  PICST_28643  predicted protein  33.64 
 
 
1931 aa  78.6  0.0000000000005  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.272891  normal 
 
 
-
 
NC_006687  CNE03650  ubiquitin-protein ligase, putative  26.32 
 
 
1840 aa  63.5  0.00000001  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.126402  n/a   
 
 
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