8 homologs were found in PanDaTox collection
for query gene PHATRDRAFT_21996 on replicon NC_011683
Organism: Phaeodactylum tricornutum CCAP 1055/1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011683  PHATRDRAFT_21996  predicted protein  100 
 
 
417 aa  868    Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_011690  PHATRDRAFT_15862  predicted protein  37.91 
 
 
530 aa  259  7e-68  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0977616  n/a   
 
 
-
 
NC_009369  OSTLU_3943  predicted protein  35.21 
 
 
507 aa  227  3e-58  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.673808 
 
 
-
 
BN001307  ANIA_01711  nonsense-mediated mRNA decay protein 3 (AFU_orthologue; AFUA_2G16750)  34.05 
 
 
511 aa  210  4e-53  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.687985  normal 
 
 
-
 
NC_006680  CNK01600  RNA binding protein, putative  35.7 
 
 
564 aa  204  2e-51  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.20499  n/a   
 
 
-
 
NC_009042  PICST_70663  predicted protein  32.77 
 
 
517 aa  197  3e-49  Scheffersomyces stipitis CBS 6054  Eukaryota  hitchhiker  0.00928066  normal 
 
 
-
 
NC_010525  Tneu_0699  NMD3 family protein  25.68 
 
 
289 aa  48.5  0.0002  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal 
 
 
-
 
CP001800  Ssol_0192  NMD3 family protein  23.85 
 
 
237 aa  43.1  0.01  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
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