More than 300 homologs were found in PanDaTox collection
for query gene PCC7424_0031 on replicon NC_011729
Organism: Cyanothece sp. PCC 7424



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011729  PCC7424_0031  two component transcriptional regulator, LuxR family  100 
 
 
229 aa  462  1e-129  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011726  PCC8801_2430  two component transcriptional regulator, LuxR family  71.62 
 
 
223 aa  322  4e-87  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3680  two component transcriptional regulator, LuxR family  71.62 
 
 
223 aa  322  4e-87  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.233635 
 
 
-
 
NC_007413  Ava_2324  two component LuxR family transcriptional regulator  60.7 
 
 
245 aa  286  2e-76  Anabaena variabilis ATCC 29413  Bacteria  normal  0.42123  normal 
 
 
-
 
NC_014248  Aazo_0819  LuxR family two component transcriptional regulator  60.26 
 
 
227 aa  273  2e-72  'Nostoc azollae' 0708  Bacteria  normal  0.633548  n/a   
 
 
-
 
NC_011884  Cyan7425_0981  two component transcriptional regulator, LuxR family  57.46 
 
 
221 aa  272  4e-72  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.416641 
 
 
-
 
NC_008312  Tery_4025  two component LuxR family transcriptional regulator  53.71 
 
 
230 aa  232  4e-60  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.236685 
 
 
-
 
NC_007413  Ava_0301  two component LuxR family transcriptional regulator  45.65 
 
 
231 aa  191  7e-48  Anabaena variabilis ATCC 29413  Bacteria  normal  0.54347  normal 
 
 
-
 
NC_013161  Cyan8802_1838  two component transcriptional regulator, LuxR family  46.32 
 
 
231 aa  189  4e-47  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1812  two component transcriptional regulator, LuxR family  46.32 
 
 
231 aa  189  4e-47  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_4491  two component LuxR family transcriptional regulator  44.25 
 
 
233 aa  189  4e-47  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.697305 
 
 
-
 
NC_014248  Aazo_2987  LuxR family two component transcriptional regulator  45.99 
 
 
231 aa  186  2e-46  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_01981  two-component response regulator  41.33 
 
 
242 aa  182  4e-45  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.125891  n/a   
 
 
-
 
NC_008816  A9601_01871  two-component response regulator  40.89 
 
 
242 aa  180  2e-44  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.528311  n/a   
 
 
-
 
NC_007604  Synpcc7942_1860  two component LuxR family transcriptional regulator  43.36 
 
 
235 aa  179  3e-44  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009976  P9211_01871  two-component response regulator  42.67 
 
 
242 aa  178  5e-44  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4627  two component transcriptional regulator, LuxR family  42.92 
 
 
226 aa  178  5e-44  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007577  PMT9312_0171  two component LuxR family transcriptional regulator  40.44 
 
 
242 aa  178  8e-44  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_02441  two-component response regulator  41.33 
 
 
242 aa  177  1e-43  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.72299  normal 
 
 
-
 
NC_007335  PMN2A_1537  two component LuxR family transcriptional regulator  41.33 
 
 
242 aa  177  1e-43  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2955  two component transcriptional regulator, LuxR family  43.11 
 
 
231 aa  176  2e-43  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.800941 
 
 
-
 
NC_009091  P9301_01891  two-component response regulator  40.44 
 
 
242 aa  176  3e-43  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.991625  n/a   
 
 
-
 
NC_007513  Syncc9902_2107  two component LuxR family transcriptional regulator  40.89 
 
 
245 aa  170  2e-41  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_2427  two component LuxR family transcriptional regulator  40.71 
 
 
245 aa  168  7e-41  Synechococcus sp. CC9605  Bacteria  normal  0.27075  normal 
 
 
-
 
NC_013161  Cyan8802_1605  two component transcriptional regulator, LuxR family  39.56 
 
 
216 aa  164  1e-39  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1580  two component transcriptional regulator, LuxR family  39.56 
 
 
216 aa  164  1e-39  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_3628  two component LuxR family transcriptional regulator  38.84 
 
 
225 aa  160  1e-38  Anabaena variabilis ATCC 29413  Bacteria  normal  0.717242  normal  0.142765 
 
 
-
 
NC_014248  Aazo_2887  LuxR family two component transcriptional regulator  38.84 
 
 
225 aa  160  1e-38  'Nostoc azollae' 0708  Bacteria  normal  0.526109  n/a   
 
 
-
 
NC_008312  Tery_4323  two component LuxR family transcriptional regulator  38.39 
 
 
215 aa  159  3e-38  Trichodesmium erythraeum IMS101  Bacteria  normal  0.115662  normal  0.727411 
 
 
-
 
NC_011884  Cyan7425_5215  two component transcriptional regulator, LuxR family  39.82 
 
 
217 aa  157  2e-37  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008820  P9303_27181  two-component response regulator  40 
 
 
233 aa  156  3e-37  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_2881  two component transcriptional regulator, LuxR family  36.91 
 
 
212 aa  153  2e-36  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011675  PHATRDRAFT_11994  diatom response regulator 2  34.5 
 
 
222 aa  132  4e-30  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_011675  PHATRDRAFT_45539  diatom response regulator 1  31.62 
 
 
319 aa  114  2e-24  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_009668  Oant_2873  two component LuxR family transcriptional regulator  33.48 
 
 
216 aa  109  3e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1887  two component transcriptional regulator  33.48 
 
 
231 aa  108  5e-23  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.882564  normal  0.344123 
 
 
-
 
NC_009077  Mjls_4681  two component transcriptional regulator  33.48 
 
 
230 aa  105  5e-22  Mycobacterium sp. JLS  Bacteria  normal  normal  0.354926 
 
 
-
 
NC_008705  Mkms_4387  two component transcriptional regulator  33.48 
 
 
230 aa  105  5e-22  Mycobacterium sp. KMS  Bacteria  normal  0.0316317  normal 
 
 
-
 
NC_008146  Mmcs_4301  two component transcriptional regulator  33.48 
 
 
230 aa  105  5e-22  Mycobacterium sp. MCS  Bacteria  normal  0.681825  n/a   
 
 
-
 
NC_008726  Mvan_4844  two component transcriptional regulator  33.91 
 
 
231 aa  105  6e-22  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.312171 
 
 
-
 
NC_009565  TBFG_10999  two component response transcriptional regulatory protein MprA  33.33 
 
 
230 aa  102  3e-21  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  1.88235e-09  normal  0.671639 
 
 
-
 
NC_008312  Tery_3155  adenylate/guanylate cyclase  39.66 
 
 
1172 aa  102  7e-21  Trichodesmium erythraeum IMS101  Bacteria  normal  0.386213  hitchhiker  0.00095291 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.88 
 
 
222 aa  101  8e-21  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_011312  VSAL_I2575  chitin degradation sensor protein  38.78 
 
 
1127 aa  101  1e-20  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  30 
 
 
222 aa  100  2e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_013440  Hoch_4952  response regulator receiver protein  41.94 
 
 
317 aa  100  2e-20  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  32.16 
 
 
238 aa  100  2e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.500036 
 
 
-
 
NC_009767  Rcas_4445  two component transcriptional regulator  40.68 
 
 
229 aa  99.4  4e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.14031 
 
 
-
 
NC_013411  GYMC61_1696  two component transcriptional regulator, winged helix family  40.8 
 
 
224 aa  99.4  4e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  41.53 
 
 
229 aa  99.4  4e-20  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.179681 
 
 
-
 
NC_014248  Aazo_2338  GAF sensor-containing adenylate/guanylate cyclase  38.79 
 
 
1180 aa  99.4  4e-20  'Nostoc azollae' 0708  Bacteria  normal  0.0263037  n/a   
 
 
-
 
NC_009380  Strop_1873  response regulator receiver  42.98 
 
 
326 aa  99.4  5e-20  Salinispora tropica CNB-440  Bacteria  normal  normal  0.402703 
 
 
-
 
NC_013456  VEA_002587  chitin catabolic cascade sensor histidine kinase ChiS  39.42 
 
 
1111 aa  99  6e-20  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3286  two component transcriptional regulator, winged helix family  32.17 
 
 
228 aa  98.6  7e-20  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.167791  n/a   
 
 
-
 
NC_009953  Sare_1866  response regulator receiver modulated diguanylate cyclase  42.15 
 
 
326 aa  98.2  9e-20  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1572  two component LuxR family transcriptional regulator  34.21 
 
 
218 aa  98.2  9e-20  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.972408 
 
 
-
 
NC_010581  Bind_3546  two component transcriptional regulator  33.33 
 
 
273 aa  97.8  1e-19  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.376665  normal  0.686762 
 
 
-
 
NC_009783  VIBHAR_03422  hypothetical protein  34.13 
 
 
1128 aa  98.2  1e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013162  Coch_1562  histidine kinase  38.89 
 
 
1296 aa  97.8  1e-19  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.655639  n/a   
 
 
-
 
NC_010505  Mrad2831_3275  response regulator FixJ  32.72 
 
 
205 aa  97.8  1e-19  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0904  two component transcriptional regulator, winged helix family  34.07 
 
 
254 aa  97.8  1e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.936287  normal  0.32173 
 
 
-
 
NC_010571  Oter_0804  two component LuxR family transcriptional regulator  30.45 
 
 
204 aa  97.1  2e-19  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3850  DNA-binding transcriptional regulator CpxR  34.72 
 
 
232 aa  97.1  2e-19  Dickeya dadantii Ech703  Bacteria  normal  0.308855  n/a   
 
 
-
 
NC_007413  Ava_2239  adenylate/guanylate cyclase  41.38 
 
 
1156 aa  96.7  2e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  0.159061  normal 
 
 
-
 
NC_014212  Mesil_2802  two component transcriptional regulator, winged helix family  40.65 
 
 
219 aa  97.4  2e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.204502 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  32.76 
 
 
224 aa  97.1  2e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008789  Hhal_1901  response regulator receiver protein  39.66 
 
 
125 aa  96.7  3e-19  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0128  DNA-binding transcriptional regulator CpxR  31.48 
 
 
232 aa  96.7  3e-19  Pectobacterium wasabiae WPP163  Bacteria  normal  0.3237  n/a   
 
 
-
 
NC_013730  Slin_5387  two component transcriptional regulator, winged helix family  28.81 
 
 
236 aa  96.7  3e-19  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_0695  response regulator receiver  35.83 
 
 
170 aa  96.7  3e-19  Methanococcoides burtonii DSM 6242  Archaea  normal  0.412637  n/a   
 
 
-
 
NC_013216  Dtox_1377  two component transcriptional regulator, winged helix family  40.8 
 
 
225 aa  96.7  3e-19  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  3.01655e-08 
 
 
-
 
NC_012917  PC1_0136  DNA-binding transcriptional regulator CpxR  31.94 
 
 
232 aa  96.7  3e-19  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  30.21 
 
 
215 aa  95.9  4e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  30.22 
 
 
223 aa  96.3  4e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013521  Sked_02660  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  43.7 
 
 
253 aa  96.3  4e-19  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.646611  normal 
 
 
-
 
NC_007954  Sden_1699  ATP-binding region, ATPase-like protein  40.77 
 
 
1396 aa  96.3  4e-19  Shewanella denitrificans OS217  Bacteria  normal  0.170141  n/a   
 
 
-
 
NC_009675  Anae109_2297  CheA signal transduction histidine kinase  42.37 
 
 
799 aa  95.9  5e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2625  two component transcriptional regulator  31.19 
 
 
232 aa  95.9  5e-19  Marinomonas sp. MWYL1  Bacteria  normal  unclonable  5.61273e-12 
 
 
-
 
NC_008347  Mmar10_0766  two component transcriptional regulator  41.18 
 
 
233 aa  95.5  5e-19  Maricaulis maris MCS10  Bacteria  normal  0.528482  normal  0.302775 
 
 
-
 
NC_009091  P9301_01531  two-component response regulator  41.53 
 
 
248 aa  95.5  6e-19  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1119  two component LuxR family transcriptional regulator  33.18 
 
 
208 aa  95.1  8e-19  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_0131  response regulator receiver  38.84 
 
 
132 aa  95.1  8e-19  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  31.33 
 
 
213 aa  95.1  8e-19  Opitutus terrae PB90-1  Bacteria  normal  normal  0.226192 
 
 
-
 
NC_009767  Rcas_3604  putative PAS/PAC sensor protein  40 
 
 
619 aa  95.1  9e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.562878 
 
 
-
 
NC_008816  A9601_01511  two-component response regulator  41.53 
 
 
248 aa  94.4  1e-18  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1740  two component transcriptional regulator, winged helix family  40 
 
 
225 aa  94.4  1e-18  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  2.04942e-09  n/a   
 
 
-
 
NC_013132  Cpin_3979  two component transcriptional regulator, LuxR family  23.98 
 
 
220 aa  94.4  1e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.487116  normal  0.704163 
 
 
-
 
NC_007413  Ava_0065  response regulator receiver domain-containing protein  37.5 
 
 
196 aa  94.7  1e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  0.670969  normal  0.0252366 
 
 
-
 
NC_009664  Krad_3620  two component transcriptional regulator, winged helix family  36.29 
 
 
239 aa  94.7  1e-18  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0253056  normal  0.477246 
 
 
-
 
NC_013162  Coch_0209  two component transcriptional regulator, winged helix family  36.36 
 
 
251 aa  94.4  1e-18  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0136  two component transcriptional regulator  41.53 
 
 
248 aa  94.4  1e-18  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2709  two component transcriptional regulator, winged helix family  30 
 
 
236 aa  94  2e-18  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0011921  normal 
 
 
-
 
NC_013174  Jden_1602  two component transcriptional regulator, LuxR family  26.41 
 
 
226 aa  93.6  2e-18  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2666  two component transcriptional regulator, AraC family  38.71 
 
 
251 aa  93.6  2e-18  Spirosoma linguale DSM 74  Bacteria  normal  0.21287  normal  0.224489 
 
 
-
 
NC_008817  P9515_01621  two-component response regulator  41.53 
 
 
248 aa  93.6  2e-18  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.367767  n/a   
 
 
-
 
NC_012793  GWCH70_0170  two component transcriptional regulator, winged helix family  31.28 
 
 
232 aa  93.2  3e-18  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0693  two component transcriptional regulator, winged helix family  27.63 
 
 
229 aa  92.8  3e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0513  two component transcriptional regulator, winged helix family  44.8 
 
 
228 aa  93.2  3e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  0.985837  n/a   
 
 
-
 
NC_013521  Sked_19740  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  26.75 
 
 
216 aa  93.2  3e-18  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682926  normal 
 
 
-
 
NC_010086  Bmul_3459  two component transcriptional regulator  40.98 
 
 
246 aa  93.2  3e-18  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.368834  normal 
 
 
-
 
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