9 homologs were found in PanDaTox collection
for query gene PC1_0040 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012917  PC1_0040  hypothetical protein  100 
 
 
134 aa  276  7e-74  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1429  metallo-beta-lactamase family protein  42.72 
 
 
444 aa  82  0.000000000000003  Burkholderia thailandensis E264  Bacteria  normal  0.34824  n/a   
 
 
-
 
NC_006348  BMA2018  metallo-beta-lactamase family protein  41.75 
 
 
395 aa  79  0.00000000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3190  metallo-beta-lactamase family protein  41.75 
 
 
395 aa  79  0.00000000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  0.376596  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0896  metallo-beta-lactamase family protein  41.75 
 
 
404 aa  79.3  0.00000000000002  Burkholderia mallei SAVP1  Bacteria  normal  0.723759  n/a   
 
 
-
 
NC_008836  BMA10229_A2729  metallo-beta-lactamase family protein  41.75 
 
 
404 aa  79.3  0.00000000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  0.97914  n/a   
 
 
-
 
NC_009076  BURPS1106A_3173  metallo-beta-lactamase family protein  41.75 
 
 
486 aa  79  0.00000000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  0.485963  n/a   
 
 
-
 
NC_009080  BMA10247_1880  metallo-beta-lactamase family protein  41.75 
 
 
404 aa  79.3  0.00000000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3136  metallo-beta-lactamase family protein  40.78 
 
 
404 aa  77  0.00000000000008  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
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