8 homologs were found in PanDaTox collection
for query gene PA14_00420 on replicon NC_008463
Organism: Pseudomonas aeruginosa UCBPP-PA14



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008463  PA14_00420  histidine phosphotransfer domain-containing protein  100 
 
 
121 aa  246  8e-65  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.232942 
 
 
-
 
NC_009656  PSPA7_0034  hypothetical protein  90.08 
 
 
121 aa  223  8e-58  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0242972  n/a   
 
 
-
 
NC_004578  PSPTO_2316  sensor histidine kinase/response regulator  41.56 
 
 
477 aa  54.3  5e-07  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.857648  n/a   
 
 
-
 
NC_008463  PA14_12820  two-component sensor  35.44 
 
 
1212 aa  53.1  1e-06  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2113  PAS  44.29 
 
 
1206 aa  52  3e-06  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.819255  normal  0.387177 
 
 
-
 
NC_009656  PSPA7_1162  two-component sensor  35.06 
 
 
1215 aa  50.4  7e-06  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0303  multi-sensor hybrid histidine kinase  27.37 
 
 
1196 aa  43.1  0.001  Shewanella putrefaciens CN-32  Bacteria  normal  0.723835  n/a   
 
 
-
 
NC_008639  Cpha266_0165  multi-sensor hybrid histidine kinase  29.59 
 
 
826 aa  40.8  0.006  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>