More than 300 homologs were found in PanDaTox collection
for query gene Oter_4110 on replicon NC_010571
Organism: Opitutus terrae PB90-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010571  Oter_4110  response regulator receiver protein  100 
 
 
126 aa  257  5.0000000000000005e-68  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_1214  response regulator receiver protein  40 
 
 
125 aa  99.8  1e-20  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.678516  hitchhiker  0.000513941 
 
 
-
 
NC_013173  Dbac_0418  response regulator receiver protein  42.02 
 
 
123 aa  98.6  3e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.22885  n/a   
 
 
-
 
NC_008576  Mmc1_3210  response regulator receiver protein  39.5 
 
 
124 aa  95.9  2e-19  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2047  response regulator receiver protein  38.21 
 
 
157 aa  95.1  3e-19  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.0637102 
 
 
-
 
NC_008576  Mmc1_2817  response regulator receiver protein  38.21 
 
 
157 aa  95.1  3e-19  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_2765  response regulator receiver protein  43.1 
 
 
119 aa  93.6  9e-19  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.557597  n/a   
 
 
-
 
NC_008639  Cpha266_1786  response regulator receiver protein  41.44 
 
 
120 aa  85.9  2e-16  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_2012  response regulator receiver domain-containing protein  41.07 
 
 
122 aa  85.1  3e-16  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.631712 
 
 
-
 
NC_002939  GSU1291  response regulator  37.7 
 
 
123 aa  82.8  0.000000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0891  response regulator receiver domain-containing protein  34.45 
 
 
137 aa  81.3  0.000000000000005  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2064  response regulator receiver protein  38.33 
 
 
128 aa  80.1  0.000000000000009  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_4562  two component transcriptional regulator  37.1 
 
 
247 aa  79  0.00000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.488322  normal  0.0982939 
 
 
-
 
NC_008576  Mmc1_0776  response regulator receiver protein  33.06 
 
 
127 aa  78.6  0.00000000000003  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00000835167  normal  0.370558 
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  37.29 
 
 
458 aa  77  0.00000000000008  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_007519  Dde_1018  response regulator receiver domain-containing protein  39.64 
 
 
131 aa  76.6  0.00000000000009  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.100773  n/a   
 
 
-
 
NC_004116  SAG0393  DNA-binding response regulator  32.23 
 
 
228 aa  76.6  0.0000000000001  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.632289  n/a   
 
 
-
 
NC_007517  Gmet_0010  PAS/PAC sensor hybrid histidine kinase  36.07 
 
 
508 aa  75.9  0.0000000000002  Geobacter metallireducens GS-15  Bacteria  normal  0.0502065  normal 
 
 
-
 
NC_011992  Dtpsy_3240  two component transcriptional regulator, Fis family  36.36 
 
 
232 aa  75.5  0.0000000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.450687  n/a   
 
 
-
 
NC_010002  Daci_0516  two component Fis family transcriptional regulator  37.7 
 
 
223 aa  75.9  0.0000000000002  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0663038 
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  36.44 
 
 
458 aa  75.5  0.0000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3891  two component Fis family transcriptional regulator  36.36 
 
 
232 aa  75.5  0.0000000000002  Acidovorax sp. JS42  Bacteria  normal  normal  0.569436 
 
 
-
 
NC_010725  Mpop_0150  PAS/PAC sensor hybrid histidine kinase  37.07 
 
 
581 aa  75.1  0.0000000000003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2408  PAS/PAC sensor hybrid histidine kinase  38.84 
 
 
647 aa  75.1  0.0000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.385618  n/a   
 
 
-
 
NC_011769  DvMF_2841  response regulator receiver protein  40 
 
 
145 aa  75.5  0.0000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009439  Pmen_4294  two component, sigma54 specific, Fis family transcriptional regulator  35.59 
 
 
461 aa  75.1  0.0000000000003  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.595978 
 
 
-
 
NC_010814  Glov_1827  response regulator receiver protein  34.43 
 
 
130 aa  74.7  0.0000000000004  Geobacter lovleyi SZ  Bacteria  normal  0.32093  n/a   
 
 
-
 
NC_009485  BBta_0532  putative response regulator receiver (CheY-like protein)  35.77 
 
 
144 aa  74.3  0.0000000000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.693911  normal  0.53556 
 
 
-
 
NC_008751  Dvul_2171  response regulator receiver protein  35.96 
 
 
134 aa  74.3  0.0000000000005  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0366  multi-sensor hybrid histidine kinase  41.46 
 
 
1266 aa  73.9  0.0000000000006  Halorhodospira halophila SL1  Bacteria  normal  0.926091  n/a   
 
 
-
 
NC_013730  Slin_1754  histidine kinase  37.9 
 
 
1407 aa  73.9  0.0000000000007  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2234  response regulator receiver domain-containing protein  31.97 
 
 
130 aa  73.9  0.0000000000007  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2269  two component Fis family transcriptional regulator  36.89 
 
 
224 aa  73.9  0.0000000000007  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.606138  normal  0.860572 
 
 
-
 
NC_009483  Gura_2751  two component, sigma-54 specific, Fis family transcriptional regulator  35.9 
 
 
452 aa  73.6  0.0000000000008  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0717  two component, sigma54 specific, Fis family transcriptional regulator  36.36 
 
 
466 aa  73.6  0.0000000000008  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_0018  two component, sigma54 specific, transcriptional regulator, Fis family  31.15 
 
 
461 aa  73.6  0.0000000000008  Haliangium ochraceum DSM 14365  Bacteria  normal  0.709029  normal  0.924426 
 
 
-
 
NC_008340  Mlg_2623  two component, sigma54 specific, Fis family transcriptional regulator  39.02 
 
 
456 aa  73.6  0.0000000000008  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0008  sensory box histidine kinase/response regulator  34.43 
 
 
516 aa  73.2  0.000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_0141  putative PAS/PAC sensor protein  38.76 
 
 
837 aa  72.8  0.000000000001  Methanosphaerula palustris E1-9c  Archaea  normal  decreased coverage  0.00355903 
 
 
-
 
NC_009720  Xaut_4397  two component, sigma54 specific, Fis family transcriptional regulator  36.97 
 
 
455 aa  73.2  0.000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.090562  normal 
 
 
-
 
NC_008554  Sfum_2764  two component, sigma54 specific, Fis family transcriptional regulator  33.6 
 
 
466 aa  72.8  0.000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_0677  response regulator receiver modulated metal dependent phosphohydrolase  36 
 
 
343 aa  73.2  0.000000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.756866  n/a   
 
 
-
 
NC_012918  GM21_2694  two component, sigma54 specific, transcriptional regulator, Fis family  32.77 
 
 
461 aa  72.8  0.000000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  7.62039e-17 
 
 
-
 
NC_011831  Cagg_1830  response regulator receiver modulated diguanylate cyclase  35.9 
 
 
941 aa  72.4  0.000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  34.82 
 
 
120 aa  72.4  0.000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A0389  two component, sigma54 specific, Fis family transcriptional regulator  38.21 
 
 
432 aa  72  0.000000000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1424  two component, sigma54 specific, Fis family transcriptional regulator  33.61 
 
 
459 aa  72  0.000000000002  Shewanella sp. MR-7  Bacteria  normal  normal  0.545985 
 
 
-
 
NC_011146  Gbem_1522  two component, sigma54 specific, transcriptional regulator, Fis family  32.5 
 
 
461 aa  72.4  0.000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1294  DNA-binding response regulator  33.05 
 
 
180 aa  71.6  0.000000000003  Dehalococcoides ethenogenes 195  Bacteria  unclonable  0.00000125664  n/a   
 
 
-
 
NC_002977  MCA2848  nitrogen regulation protein NtrX, putative  38.21 
 
 
455 aa  71.6  0.000000000003  Methylococcus capsulatus str. Bath  Bacteria  normal  0.754871  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  34.75 
 
 
451 aa  72  0.000000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_009675  Anae109_0684  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
456 aa  72  0.000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0009  multi-sensor signal transduction histidine kinase  34.43 
 
 
508 aa  71.6  0.000000000003  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_1966  response regulator receiver domain-containing protein  31.03 
 
 
121 aa  72  0.000000000003  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1359  two component, sigma54 specific, Fis family transcriptional regulator  33.61 
 
 
459 aa  72  0.000000000003  Shewanella sp. MR-4  Bacteria  normal  normal  0.0913399 
 
 
-
 
NC_011894  Mnod_6615  PAS/PAC sensor hybrid histidine kinase  34.96 
 
 
660 aa  72  0.000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0224174  n/a   
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  31.97 
 
 
476 aa  72  0.000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_008577  Shewana3_1412  two component, sigma54 specific, Fis family transcriptional regulator  33.61 
 
 
459 aa  72  0.000000000003  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0963  two component transcriptional regulator  34.15 
 
 
225 aa  71.6  0.000000000003  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4525  two component Fis family transcriptional regulator  36.13 
 
 
238 aa  71.6  0.000000000003  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0396  two component, sigma54 specific, transcriptional regulator, Fis family  35.04 
 
 
453 aa  71.6  0.000000000004  Geobacter sp. M21  Bacteria  n/a    normal  0.262789 
 
 
-
 
NC_010581  Bind_1883  response regulator receiver protein  38.02 
 
 
250 aa  71.2  0.000000000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.312103  normal 
 
 
-
 
NC_012917  PC1_3049  putative two component, sigma54 specific, transcriptional regulator, Fis family  34.4 
 
 
445 aa  71.2  0.000000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0931  response regulator receiver protein  31.93 
 
 
430 aa  71.2  0.000000000004  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_0209  two component transcriptional regulator, winged helix family  33.33 
 
 
251 aa  70.9  0.000000000005  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_010087  Bmul_5813  two component transcriptional regulator  38.33 
 
 
253 aa  71.2  0.000000000005  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00548874 
 
 
-
 
NC_009438  Sputcn32_2504  two component, sigma54 specific, Fis family transcriptional regulator  32.79 
 
 
459 aa  70.9  0.000000000006  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  35 
 
 
461 aa  70.5  0.000000000007  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_008463  PA14_22760  putative two-component response regulator  36.89 
 
 
225 aa  70.5  0.000000000007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0539892 
 
 
-
 
NC_008554  Sfum_0636  response regulator receiver protein  36.28 
 
 
124 aa  70.5  0.000000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.621219  normal 
 
 
-
 
NC_009441  Fjoh_0638  two component, sigma54 specific, Fis family transcriptional regulator  37.18 
 
 
453 aa  70.5  0.000000000008  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0797  two component, sigma54 specific, transcriptional regulator, Fis family  33.06 
 
 
472 aa  70.5  0.000000000008  Rhodothermus marinus DSM 4252  Bacteria  normal  0.241811  n/a   
 
 
-
 
NC_007973  Rmet_3559  response regulator receiver domain-containing protein  38.02 
 
 
238 aa  70.5  0.000000000008  Cupriavidus metallidurans CH34  Bacteria  normal  0.0874597  normal 
 
 
-
 
NC_008554  Sfum_0621  two component, sigma54 specific, Fis family transcriptional regulator  32.23 
 
 
472 aa  70.5  0.000000000008  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1548  two component, sigma54 specific, transcriptional regulator, Fis family  32.79 
 
 
459 aa  70.1  0.000000000009  Shewanella baltica OS223  Bacteria  normal  0.816634  normal 
 
 
-
 
NC_010505  Mrad2831_2108  multi-sensor hybrid histidine kinase  33.88 
 
 
1014 aa  70.1  0.000000000009  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.659699  normal  0.848073 
 
 
-
 
NC_009997  Sbal195_2953  two component, sigma54 specific, Fis family transcriptional regulator  32.79 
 
 
459 aa  70.1  0.000000000009  Shewanella baltica OS195  Bacteria  normal  normal  0.0277282 
 
 
-
 
NC_007794  Saro_1446  multi-sensor hybrid histidine kinase  38.14 
 
 
811 aa  70.1  0.000000000009  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2810  two component, sigma54 specific, Fis family transcriptional regulator  32.79 
 
 
459 aa  70.1  0.000000000009  Shewanella baltica OS155  Bacteria  normal  0.776829  n/a   
 
 
-
 
NC_004347  SO_3138  C4-dicarboxylate transport transcriptional regulatory protein  33.61 
 
 
459 aa  69.7  0.00000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_014148  Plim_3722  response regulator receiver  34.4 
 
 
143 aa  69.7  0.00000000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0010  multi-sensor signal transduction histidine kinase  36.07 
 
 
511 aa  69.7  0.00000000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0259  two component signal transduction response regulator  31.9 
 
 
513 aa  69.7  0.00000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2828  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
459 aa  70.1  0.00000000001  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5808  sensor histidine kinase  35.25 
 
 
1299 aa  69.7  0.00000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.284316  normal 
 
 
-
 
NC_010814  Glov_3603  response regulator receiver protein  33.33 
 
 
131 aa  69.7  0.00000000001  Geobacter lovleyi SZ  Bacteria  normal  0.656399  n/a   
 
 
-
 
NC_007643  Rru_A2332  response regulator receiver domain-containing protein  37.82 
 
 
126 aa  69.7  0.00000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_15610  Response regulator, transciptional regulatory protein  33.33 
 
 
225 aa  70.1  0.00000000001  Azotobacter vinelandii DJ  Bacteria  normal  0.0572115  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  37.5 
 
 
227 aa  69.7  0.00000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  34.65 
 
 
231 aa  69.7  0.00000000001  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_008340  Mlg_0669  response regulator receiver protein  37.4 
 
 
123 aa  69.7  0.00000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3272  multi-sensor hybrid histidine kinase  33.33 
 
 
1011 aa  69.7  0.00000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3940  putative two-component response regulatory protein, response regulator receiver  32.79 
 
 
155 aa  70.1  0.00000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.238381  normal  0.445341 
 
 
-
 
NC_009832  Spro_3651  two component, sigma54 specific, Fis family transcriptional regulator  33.88 
 
 
445 aa  68.9  0.00000000002  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3131  response regulator receiver domain-containing protein  34.38 
 
 
138 aa  69.3  0.00000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.164774  normal 
 
 
-
 
NC_009656  PSPA7_1922  putative two-component response regulator  34.17 
 
 
225 aa  69.3  0.00000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.804247  n/a   
 
 
-
 
NC_009524  PsycPRwf_2121  osmolarity response regulator  36.59 
 
 
248 aa  69.3  0.00000000002  Psychrobacter sp. PRwf-1  Bacteria  normal  0.201602  normal  0.531848 
 
 
-
 
NC_008254  Meso_0600  CheA signal transduction histidine kinase  38.84 
 
 
706 aa  68.9  0.00000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2461  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  36.07 
 
 
581 aa  69.3  0.00000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1340  two component, sigma54 specific, Fis family transcriptional regulator  35.54 
 
 
457 aa  68.9  0.00000000002  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
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