More than 300 homologs were found in PanDaTox collection
for query gene Oter_1720 on replicon NC_010571
Organism: Opitutus terrae PB90-1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010571  Oter_1720  two component LuxR family transcriptional regulator  100 
 
 
301 aa  587  1e-167  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal  0.616267 
 
 
-
 
NC_008825  Mpe_A3585  two component LuxR family transcriptional regulator  40.74 
 
 
306 aa  191  2e-47  Methylibium petroleiphilum PM1  Bacteria  normal  0.295986  normal 
 
 
-
 
NC_008825  Mpe_A0671  two component LuxR family transcriptional regulator  41.03 
 
 
333 aa  186  3e-46  Methylibium petroleiphilum PM1  Bacteria  normal  0.0205263  normal 
 
 
-
 
NC_008752  Aave_3524  two component LuxR family transcriptional regulator  40.94 
 
 
353 aa  184  1.0000000000000001e-45  Acidovorax citrulli AAC00-1  Bacteria  normal  0.406085  normal  0.428998 
 
 
-
 
NC_008781  Pnap_0979  response regulator receiver protein  38.29 
 
 
336 aa  183  3e-45  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1761  two component LuxR family transcriptional regulator  39.07 
 
 
311 aa  183  4.0000000000000006e-45  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1713  two component LuxR family transcriptional regulator  39.88 
 
 
361 aa  181  1e-44  Burkholderia xenovorans LB400  Bacteria  normal  0.310925  normal 
 
 
-
 
NC_010524  Lcho_1083  two component LuxR family transcriptional regulator  40.47 
 
 
316 aa  180  2.9999999999999997e-44  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_0790  multi-sensor signal transduction histidine kinase  44.2 
 
 
566 aa  179  5.999999999999999e-44  Cyanothece sp. PCC 7425  Bacteria  normal  0.391268  normal 
 
 
-
 
NC_012791  Vapar_4238  two component transcriptional regulator, LuxR family  36.83 
 
 
356 aa  177  2e-43  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5666  two component LuxR family transcriptional regulator  40.45 
 
 
312 aa  177  2e-43  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.917296 
 
 
-
 
NC_007948  Bpro_0562  two component LuxR family transcriptional regulator  37.54 
 
 
297 aa  177  2e-43  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1445  two component LuxR family transcriptional regulator  39.62 
 
 
308 aa  177  3e-43  Dechloromonas aromatica RCB  Bacteria  normal  0.446624  normal 
 
 
-
 
NC_009620  Smed_4179  response regulator receiver protein  37.17 
 
 
309 aa  176  3e-43  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.15819 
 
 
-
 
NC_009654  Mmwyl1_0962  response regulator receiver protein  36.83 
 
 
304 aa  177  3e-43  Marinomonas sp. MWYL1  Bacteria  normal  0.512477  normal 
 
 
-
 
NC_008061  Bcen_3730  two component LuxR family transcriptional regulator  40.13 
 
 
312 aa  175  7e-43  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4638  two component LuxR family transcriptional regulator  40.13 
 
 
312 aa  175  7e-43  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1731  response regulator receiver protein  36.94 
 
 
361 aa  173  2.9999999999999996e-42  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.319975 
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  53.25 
 
 
337 aa  172  6.999999999999999e-42  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_011369  Rleg2_3066  two component transcriptional regulator, LuxR family  36.66 
 
 
305 aa  171  2e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2977  response regulator receiver domain-containing protein  36.93 
 
 
303 aa  170  2e-41  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.13601 
 
 
-
 
NC_013422  Hneap_1587  two component transcriptional regulator, LuxR family  38.61 
 
 
292 aa  169  4e-41  Halothiobacillus neapolitanus c2  Bacteria  normal  0.522901  n/a   
 
 
-
 
NC_012850  Rleg_3321  two component transcriptional regulator, LuxR family  36.01 
 
 
305 aa  168  1e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.536368 
 
 
-
 
NC_010002  Daci_0218  two component LuxR family transcriptional regulator  35.9 
 
 
339 aa  167  2.9999999999999998e-40  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0652  two component LuxR family transcriptional regulator  37.71 
 
 
305 aa  166  4e-40  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0800453  normal  0.813173 
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  55.73 
 
 
488 aa  166  4e-40  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.182398 
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  60.45 
 
 
367 aa  165  6.9999999999999995e-40  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3866  response regulator receiver  37.09 
 
 
309 aa  164  2.0000000000000002e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.370865  normal 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  56.49 
 
 
407 aa  163  3e-39  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.142048 
 
 
-
 
NC_007778  RPB_1250  two component LuxR family transcriptional regulator  36.42 
 
 
309 aa  160  2e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886948  normal 
 
 
-
 
NC_011989  Avi_3499  transcriptional regulator LuxR family  36.27 
 
 
312 aa  160  2e-38  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1441  two component transcriptional regulator, LuxR family  35.88 
 
 
308 aa  160  2e-38  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_3574  two component transcriptional regulator, LuxR family  40.07 
 
 
301 aa  160  3e-38  Methylobacterium populi BJ001  Bacteria  normal  0.0249095  normal 
 
 
-
 
NC_010581  Bind_0974  two component LuxR family transcriptional regulator  35.51 
 
 
309 aa  160  3e-38  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.883175  normal  0.426964 
 
 
-
 
NC_011757  Mchl_3692  two component transcriptional regulator, LuxR family  38.33 
 
 
300 aa  158  9e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.170876  normal 
 
 
-
 
NC_008709  Ping_2984  two component transcriptional regulator, LuxR family protein  35.22 
 
 
295 aa  157  2e-37  Psychromonas ingrahamii 37  Bacteria  normal  0.43543  normal  0.546259 
 
 
-
 
NC_010505  Mrad2831_5514  two component LuxR family transcriptional regulator  36.36 
 
 
305 aa  157  2e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.211273 
 
 
-
 
NC_011138  MADE_00878  two-component response regulator  34.42 
 
 
298 aa  157  2e-37  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3383  response regulator receiver  37.98 
 
 
300 aa  157  2e-37  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010627  Bphy_7700  multi-sensor signal transduction histidine kinase  53.16 
 
 
541 aa  153  4e-36  Burkholderia phymatum STM815  Bacteria  normal  0.163324  normal  0.507763 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  52.45 
 
 
397 aa  152  5e-36  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_010623  Bphy_4530  response regulator receiver sensor signal transduction histidine kinase  49.01 
 
 
386 aa  152  5e-36  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2562  response regulator receiver Signal transduction histidine kinase  46.25 
 
 
437 aa  152  7e-36  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3869  response regulator receiver protein  34.17 
 
 
301 aa  152  8.999999999999999e-36  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_2002  two component transcriptional regulator, LuxR family  34.41 
 
 
306 aa  151  1e-35  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_014248  Aazo_4465  response regulator receiver sensor signal transduction histidine kinase  52.99 
 
 
437 aa  149  4e-35  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6559  multi-sensor signal transduction histidine kinase  51.9 
 
 
541 aa  149  4e-35  Burkholderia phymatum STM815  Bacteria  normal  normal  0.59439 
 
 
-
 
NC_012918  GM21_3242  response regulator receiver sensor signal transduction histidine kinase  48.43 
 
 
441 aa  149  5e-35  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_4136  response regulator receiver Signal transduction histidine kinase  47.86 
 
 
440 aa  149  7e-35  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.00000660181  hitchhiker  0.00876613 
 
 
-
 
NC_007413  Ava_2150  response regulator receiver Signal transduction histidine kinase  45.4 
 
 
443 aa  149  8e-35  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.394463 
 
 
-
 
NC_010814  Glov_1118  response regulator receiver sensor signal transduction histidine kinase  44.77 
 
 
452 aa  149  8e-35  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000972917  n/a   
 
 
-
 
NC_010551  BamMC406_1236  response regulator receiver sensor signal transduction histidine kinase  48.34 
 
 
386 aa  149  8e-35  Burkholderia ambifaria MC40-6  Bacteria  normal  0.493129  normal 
 
 
-
 
NC_011146  Gbem_1018  response regulator receiver sensor signal transduction histidine kinase  48.45 
 
 
441 aa  147  1.0000000000000001e-34  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00729938  n/a   
 
 
-
 
NC_007794  Saro_1665  two component LuxR family transcriptional regulator  36.3 
 
 
307 aa  147  2.0000000000000003e-34  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4155  response regulator receiver sensor signal transduction histidine kinase  46.67 
 
 
440 aa  146  4.0000000000000006e-34  Trichodesmium erythraeum IMS101  Bacteria  normal  0.50715  normal 
 
 
-
 
NC_009523  RoseRS_2347  response regulator receiver protein  51.15 
 
 
202 aa  146  4.0000000000000006e-34  Roseiflexus sp. RS-1  Bacteria  normal  0.56815  normal 
 
 
-
 
NC_009767  Rcas_3134  response regulator receiver protein  51.16 
 
 
200 aa  144  1e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6236  multi-sensor signal transduction histidine kinase  51.02 
 
 
553 aa  142  7e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.914679 
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  45.78 
 
 
353 aa  139  6e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_008340  Mlg_2429  response regulator receiver modulated metal dependent phosphohydrolase  51.94 
 
 
480 aa  136  6.0000000000000005e-31  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.129673 
 
 
-
 
NC_013440  Hoch_2175  response regulator receiver sensor signal transduction histidine kinase  52.03 
 
 
395 aa  135  7.000000000000001e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.924768  normal  0.400775 
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  48.23 
 
 
370 aa  135  8e-31  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  44.08 
 
 
314 aa  135  9.999999999999999e-31  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3147  two component transcriptional regulator, LuxR family  52.99 
 
 
302 aa  135  9.999999999999999e-31  Variovorax paradoxus S110  Bacteria  normal  0.235206  n/a   
 
 
-
 
NC_013161  Cyan8802_1510  response regulator receiver sensor signal transduction histidine kinase  45.45 
 
 
374 aa  132  5e-30  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1483  response regulator receiver sensor signal transduction histidine kinase  45.45 
 
 
374 aa  132  5e-30  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  45.58 
 
 
359 aa  131  1.0000000000000001e-29  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  46.88 
 
 
383 aa  131  1.0000000000000001e-29  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  51.28 
 
 
222 aa  131  2.0000000000000002e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_013161  Cyan8802_3359  response regulator receiver sensor signal transduction histidine kinase  43.48 
 
 
395 aa  129  7.000000000000001e-29  Cyanothece sp. PCC 8802  Bacteria  normal  0.361398  normal 
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  44.67 
 
 
377 aa  129  7.000000000000001e-29  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_011726  PCC8801_2743  response regulator receiver sensor signal transduction histidine kinase  43.48 
 
 
395 aa  129  7.000000000000001e-29  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  47.1 
 
 
339 aa  129  7.000000000000001e-29  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  41.72 
 
 
383 aa  129  7.000000000000001e-29  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_013161  Cyan8802_1380  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  43.59 
 
 
715 aa  129  8.000000000000001e-29  Cyanothece sp. PCC 8802  Bacteria  normal  0.923401  normal 
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  40 
 
 
308 aa  129  8.000000000000001e-29  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  40 
 
 
308 aa  129  8.000000000000001e-29  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_4225  multi-sensor hybrid histidine kinase  45.19 
 
 
1322 aa  128  1.0000000000000001e-28  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  45.65 
 
 
339 aa  128  1.0000000000000001e-28  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1354  two component LuxR family transcriptional regulator  50.83 
 
 
349 aa  128  1.0000000000000001e-28  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  41.67 
 
 
383 aa  128  1.0000000000000001e-28  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2855  response regulator receiver sensor signal transduction histidine kinase  48.82 
 
 
348 aa  127  2.0000000000000002e-28  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  34.84 
 
 
349 aa  127  2.0000000000000002e-28  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  41.67 
 
 
383 aa  127  2.0000000000000002e-28  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  44.53 
 
 
348 aa  127  3e-28  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_011726  PCC8801_1350  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  42.95 
 
 
715 aa  127  3e-28  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_0860  response regulator  44.93 
 
 
339 aa  126  4.0000000000000003e-28  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008709  Ping_0978  response regulator receiver modulated diguanylate cyclase  44.96 
 
 
322 aa  126  4.0000000000000003e-28  Psychromonas ingrahamii 37  Bacteria  normal  0.97362  decreased coverage  0.00116316 
 
 
-
 
NC_010511  M446_0591  two component LuxR family transcriptional regulator  53.45 
 
 
301 aa  126  4.0000000000000003e-28  Methylobacterium sp. 4-46  Bacteria  normal  0.477799  hitchhiker  0.00469436 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  44.93 
 
 
338 aa  125  6e-28  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  44.93 
 
 
338 aa  125  6e-28  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  44.93 
 
 
338 aa  125  6e-28  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  43.05 
 
 
369 aa  125  6e-28  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  44.93 
 
 
338 aa  125  6e-28  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  43.45 
 
 
358 aa  125  7e-28  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  42.65 
 
 
384 aa  125  8.000000000000001e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  45.57 
 
 
365 aa  125  9e-28  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  45.32 
 
 
340 aa  125  9e-28  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  44.08 
 
 
395 aa  125  1e-27  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  43.71 
 
 
377 aa  124  1e-27  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>