14 homologs were found in PanDaTox collection
for query gene Oter_0580 on replicon NC_010571
Organism: Opitutus terrae PB90-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010571  Oter_0580  anti-ECFsigma factor, ChrR  100 
 
 
267 aa  543  1e-153  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_4633  putative transmembrane anti-sigma factor  27.47 
 
 
279 aa  116  3.9999999999999997e-25  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_1126  hypothetical protein  27.34 
 
 
284 aa  115  7.999999999999999e-25  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.00000000890394  normal  0.601891 
 
 
-
 
NC_013730  Slin_3340  hypothetical protein  34.08 
 
 
263 aa  83.6  0.000000000000003  Spirosoma linguale DSM 74  Bacteria  normal  0.205773  normal  0.325708 
 
 
-
 
NC_008009  Acid345_4526  hypothetical protein  26.38 
 
 
311 aa  62.4  0.000000008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.822135 
 
 
-
 
NC_013216  Dtox_3615  putative transmembrane anti-sigma factor  29.58 
 
 
393 aa  55.5  0.0000008  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0892578  normal  0.258616 
 
 
-
 
NC_009253  Dred_0040  putative transmembrane anti-sigma factor  34.18 
 
 
363 aa  47.8  0.0002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.411333  n/a   
 
 
-
 
NC_008009  Acid345_1341  hypothetical protein  36.62 
 
 
163 aa  47  0.0003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0131  putative transmembrane anti-sigma factor  38 
 
 
347 aa  45.4  0.001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000144677  n/a   
 
 
-
 
NC_011369  Rleg2_3435  putative transmembrane anti-sigma factor  27.43 
 
 
265 aa  43.1  0.004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_0804  hypothetical protein  20.35 
 
 
188 aa  43.5  0.004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2732  hypothetical protein  27.59 
 
 
200 aa  42.4  0.007  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2976  hypothetical protein  36.36 
 
 
260 aa  42  0.009  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.458686  normal 
 
 
-
 
NC_009565  TBFG_10094  hypothetical protein  32.8 
 
 
282 aa  42  0.009  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.77599 
 
 
-
 
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